RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 OR10Z1Q8NGY1 313 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 TMEM255BQ8WV15 326 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 DYDC1Q8WWB3 177 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 RPL3LQ92901 407 aaKnown RBP4.09□□□□□ -1.75
HERC1-213ENST00000561359 ZIM3Q96PE6 472 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 FMO2Q99518 471 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 IFT22Q9H7X7 185 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 KRCC1Q9NPI7 259 aaPredicted RBP4.09□□□□□ -1.75
HERC1-213ENST00000561359 GRHPRQ9UBQ7 328 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 A4GNTQ9UNA3 340 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 LHFPL6Q9Y693 200 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 TRAV27A0A087WT01 109 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 IGHV2-26A0A0B4J1V2 119 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 HTR3EA5X5Y0 456 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 M0R135 149 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 AP4M1O00189 453 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 SLC1A7O00341 560 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 HSPA12AO43301 675 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 IL6P05231 212 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 ELANEP08246 267 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 ABHD2P08910 425 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 FAM106CPP0CH98 169 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 ZNF728P0DKX0 622 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 S100A1P23297 94 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 DDOSTP39656 456 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 SLC7A2P52569 658 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 DLX6P56179 175 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 HIST1H3AP68431 136 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 SCARB2Q14108 478 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 TRIM25Q14258 630 aaKnown RBP4.08□□□□□ -1.76
HERC1-213ENST00000561359 DUSP7Q16829 419 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 KRTAP27-1Q3LI81 207 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 SMUG1Q53HV7 270 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 CT83Q5H943 113 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 HIST2H3PS2Q5TEC6 136 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 AGBL2Q5U5Z8 902 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 ACSM6Q6P461 480 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 KCTD8Q6ZWB6 473 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 HIST2H3AQ71DI3 136 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 LINC00346Q8IVM7 164 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 NKAIN4Q8IVV8 208 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 OR6V1Q8N148 313 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 C4orf33Q8N1A6 199 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 MAPKAPK5-AS1Q8N8E1 139 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 OR2AJ1Q8NGZ0 328 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 OR51A7Q8NH64 312 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 TMEM239Q8WW34 195 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 LIPHQ8WWY8 451 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 IFT81Q8WYA0 676 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 ARPC1AQ92747 370 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 SPTSSAQ969W0 71 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 SDSLQ96GA7 329 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 ZNF799Q96GE5 643 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 OR5B12Q96R08 314 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 OR4C12Q96R67 309 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 NR1H4Q96RI1 486 aaPredicted RBP4.08□□□□□ -1.76
HERC1-213ENST00000561359 MICU1Q9BPX6 476 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 PRSS27Q9BQR3 290 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 PAPOLGQ9BWT3 736 aaKnown RBP4.08□□□□□ -1.76
HERC1-213ENST00000561359 CLEC7AQ9BXN2 247 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 GON7Q9BXV9 100 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 TLNRD1Q9H1K6 362 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 SYT4Q9H2B2 425 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 WDR55Q9H6Y2 383 aaPredicted RBP4.08□□□□□ -1.76
HERC1-213ENST00000561359 SP140LQ9H930 580 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 ACTR3BQ9P1U1 418 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 DPM3Q9P2X0 92 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 RABL2AQ9UBK7 228 aaPredicted RBP4.08□□□□□ -1.76
HERC1-213ENST00000561359 MED31Q9Y3C7 131 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 ADAM18Q9Y3Q7 739 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 DMRT1Q9Y5R6 373 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 CEPT1Q9Y6K0 416 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 COMMD3-BMI1R4GMX3 469 aa4.08□□□□□ -1.76
HERC1-213ENST00000561359 FAT2Q9NYQ8 4349 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 DNAH2Q9P225 4427 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 MAGEA13PA6NCF6 341 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 RFPL4AA6NLU0 287 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 ANXA2P2A6NMY6 339 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 RFPL4AL1F8VTS6 287 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 PFDN1O60925 122 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 SERPINA1P01009 418 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 RBP4P02753 201 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 ZNF823P16415 610 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 KRT4P19013 534 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 RBM34P42696 430 aaKnown RBP4.07□□□□□ -1.76
HERC1-213ENST00000561359 TAS2R41P59536 307 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 CTAG1AP78358 180 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 CKAP4Q07065 602 aaKnown RBP4.07□□□□□ -1.76
HERC1-213ENST00000561359 MFGE8Q08431 387 aaPredicted RBP4.07□□□□□ -1.76
HERC1-213ENST00000561359 HES1Q14469 280 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 HNF4GQ14541 408 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 RFX4Q33E94 735 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 MESTQ5EB52 335 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 ASPHD1Q5U4P2 390 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 PGM2L1Q6PCE3 622 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 ZBTB49Q6ZSB9 765 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 PATL1Q86TB9 770 aaKnown RBP4.07□□□□□ -1.76
HERC1-213ENST00000561359 HAPLN4Q86UW8 402 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 CATSPERDQ86XM0 798 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 MREGQ8N565 214 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms