RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 C22orf15Q8WYQ4 148 aa16.51■□□□□ 0.23
TSPAN3-210ENST00000561277 RGP1Q92546 391 aaPredicted RBP16.51■□□□□ 0.23
TSPAN3-210ENST00000561277 SIRT4Q9Y6E7 314 aaPredicted RBP16.51■□□□□ 0.23
TSPAN3-210ENST00000561277 SLC1A7O00341 560 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 MYL12BO14950 172 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 SIGLEC5O15389 551 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 NOS1APO75052 506 aaPredicted RBP16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 RPSAP08865 295 aaKnown RBP16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 PRKACBP22694 351 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 SOX2P48431 317 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 CEBPDP49716 269 aaPredicted RBP16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 ATP1B3P54709 279 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 MTCP1P56278 107 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 FGF12P61328 243 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 SCGB2A2Q13296 93 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 C6orf141Q5SZD1 244 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 ZFP41Q8N8Y5 198 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 DNAAF1Q8NEP3 725 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 RFT1Q96AA3 541 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 SMIM19Q96E16 107 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 MED30Q96HR3 178 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 OPALINQ96PE5 141 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 SPACA5Q96QH8 159 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 ZNF222Q9UK12 451 aa16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 FBN1P35555 2871 aaKnown RBP16.5■□□□□ 0.23
TSPAN3-210ENST00000561277 IGHV3OR16-10A0A075B7F0 116 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 RFPL4AA6NLU0 287 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 PTGES3LE9PB15 166 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 RFPL4AL1F8VTS6 287 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 FSHBP01225 129 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 KLF17Q5JT82 389 aaPredicted RBP16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 LHFPL2Q6ZUX7 228 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 PNLDC1Q8NA58 520 aaKnown RBP16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 ZNRF1Q8ND25 227 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 TMEM185AQ8NFB2 350 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 RPS4Y2Q8TD47 263 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 H1FXQ92522 213 aaKnown RBP16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 SPSB1Q96BD6 273 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 CEP19Q96LK0 163 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 ANKRD60Q9BZ19 345 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 ZCCHC4Q9H5U6 513 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 SLC25A10Q9UBX3 287 aaPredicted RBP16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 OR14J1Q9UGF5 321 aa16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 RPUSD1Q9UJJ7 312 aaKnown RBP16.49■□□□□ 0.23
TSPAN3-210ENST00000561277 PNMA8CA0A1B0GUJ8 204 aa16.48■□□□□ 0.23
TSPAN3-210ENST00000561277 ACAA1P09110 424 aaPredicted RBP16.48■□□□□ 0.23
TSPAN3-210ENST00000561277 NDUFB7P17568 137 aa16.48■□□□□ 0.23
TSPAN3-210ENST00000561277 RIPK1Q13546 671 aa16.48■□□□□ 0.23
TSPAN3-210ENST00000561277 SERPINA12Q8IW75 414 aa16.48■□□□□ 0.23
TSPAN3-210ENST00000561277 CD177Q8N6Q3 437 aa16.48■□□□□ 0.23
TSPAN3-210ENST00000561277 ZNF485Q8NCK3 441 aa16.48■□□□□ 0.23
TSPAN3-210ENST00000561277 OR5D14Q8NGL3 314 aa16.48■□□□□ 0.23
TSPAN3-210ENST00000561277 GPR148Q8TDV2 347 aa16.48■□□□□ 0.23
TSPAN3-210ENST00000561277 PCGF1Q9BSM1 259 aa16.48■□□□□ 0.23
TSPAN3-210ENST00000561277 FKBP14Q9NWM8 211 aa16.48■□□□□ 0.23
TSPAN3-210ENST00000561277 MTCH1Q9NZJ7 389 aa16.48■□□□□ 0.23
TSPAN3-210ENST00000561277 TRAV40A0A0B4J280 105 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 F8VVB4 439 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 F8VWA3 439 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 TCF21O43680 179 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 ECDO95905 644 aaPredicted RBP16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 LIPFP07098 398 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 HCKP08631 526 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 MYF6P23409 242 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 HSPA13P48723 471 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 CAPZA1P52907 286 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 ERVK11-1P61568 191 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 PARP16Q8N5Y8 322 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 OR5D18Q8NGL1 313 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 OR13C5Q8NGS8 318 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 UPRTQ96BW1 309 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 SLC6A7Q99884 636 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 ELL3Q9HB65 397 aaPredicted RBP16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 HES4Q9HCC6 221 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 SCN3BQ9NY72 215 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 NUP50Q9UKX7 468 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 MAB21L2Q9Y586 359 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 ZNF879B4DU55 563 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 OGG1O15527 345 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 SPRY1O43609 319 aaPredicted RBP16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 SULT1B1O43704 296 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 CYB5AP00167 134 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 MT-ND2P03891 347 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 SFTPBP07988 381 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 IGHV4-38-2P0DP08 117 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 PRDX2P32119 198 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 WNT4P56705 351 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 RNF144BQ7Z419 303 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 BPIFB2Q8N4F0 458 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 SGCDQ92629 289 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 GHSRQ92847 366 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 MDFIQ99750 246 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 ONECUT1Q9UBC0 465 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 ERGIC3Q9Y282 383 aa16.47■□□□□ 0.23
TSPAN3-210ENST00000561277 GPR37O15354 613 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 CDK1P06493 297 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 CD2P06729 351 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 PPIAL4GP0DN37 164 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 ARF6P62330 175 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 C11orf91Q3C1V1 193 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms