RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 RXFP4Q8TDU9 374 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 DCAKDQ8WVC6 231 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 EEF1AKMT1Q8WVE0 214 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 TWIST2Q8WVJ9 160 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ASB17Q8WXJ9 295 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ASB13Q8WXK3 278 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 TMBIM1Q969X1 311 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 DNAJC19Q96DA6 116 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 GALNT14Q96FL9 552 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 MRPL48Q96GC5 212 aaKnown RBP1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR10C1Q96KK4 312 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 FCRL1Q96LA6 429 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 COL21A1Q96P44 957 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 F2RL3Q96RI0 385 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 KLF6Q99612 283 aaPredicted RBP1.61□□□□□ -2.15
RTF1-207ENST00000561076 SIGMAR1Q99720 223 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 NIPSNAP1Q9BPW8 284 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 MRIQ9BWK5 157 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 MROQ9BYG7 248 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 YTHDF1Q9BYJ9 559 aaKnown RBP1.61□□□□□ -2.15
RTF1-207ENST00000561076 KRTAP3-1Q9BYR8 98 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR11A1Q9GZK7 315 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 PCBD2Q9H0N5 130 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 MS4A6AQ9H2W1 248 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 Q9H3A6 140 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 FBXL15Q9H469 300 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ENY2Q9NPA8 101 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ZNF446Q9NWS9 450 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 DDIT4Q9NX09 232 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 MARCH5Q9NX47 278 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 VNN3Q9NY84 501 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OPTCQ9UBM4 332 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 NUFIP1Q9UHK0 495 aaKnown RBP1.61□□□□□ -2.15
RTF1-207ENST00000561076 DKKL1Q9UK85 242 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 TRAPPC4Q9Y296 219 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 TP53TG1Q9Y2A0 90 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 POLR1DQ9Y2S0 133 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 KDM6BO15054 1643 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ABCC10Q5T3U5 1492 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 MN1Q10571 1320 aaPredicted RBP1.61□□□□□ -2.15
RTF1-207ENST00000561076 FLT4P35916 1363 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 CEMIPQ8WUJ3 1361 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 COL11A2P13942 1736 aaPredicted RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 IGLV8-61A0A075B6I0 122 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 SMIM26A0A096LP01 95 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 TGIF2-C20orf24A0A0A6YYL0 155 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 IGHV1-69DA0A0B4J2H0 117 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 IGHV3-16A0A0C4DH30 117 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 A0A0G2JMP0 313 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 CENPVL3A0A0U1RRI6 287 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 TEX50A0A1B0GTY4 177 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 SMIM9A6NGZ8 99 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 DNAJC9-AS1A6NH13 148 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 DISC1C4P0D8 188 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 LINC01619G3V211 115 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 H3BP45 60 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 MFNGO00587 321 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 COPEO14579 308 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 RGS5O15539 181 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 HCRTR1O43613 425 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 DHRS3O75911 302 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 KBTBD11O94819 623 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 IGLV1-44P01699 117 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 HLA-DPB1P04440 258 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 ALPLP05186 524 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 CRHP06850 196 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 IL3P08700 152 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 ZSCAN5DPP0CG00 497 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 OR13C7P0DN81 318 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 IFI30P13284 250 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 GTF2F2P13984 249 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 GNB3P16520 340 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 NELFEP18615 380 aaKnown RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 M6PRP20645 277 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 S100GP29377 79 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 IL2RGP31785 369 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 CDKN2BP42772 138 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 INPP1P49441 399 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 NDUFA8P51970 172 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 GTF2A1P52655 376 aaPredicted RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 FGF8P55075 233 aaPredicted RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 LINC01547P58512 204 aaPredicted RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 TAS2R43P59537 309 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 ERVPABLB-1P60509 514 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 ZNF45Q02386 682 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 BAXQ07812 192 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 INCA1Q0VD86 236 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 FHL1Q13642 323 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 RUNX3Q13761 415 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 PON3Q15166 354 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 RBMY1FQ15415 496 aaKnown RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 RGNQ15493 299 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 CCL14Q16627 93 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 GSG1Q2KHT4 349 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 ZNF718Q3SXZ3 478 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 ORMDL2Q53FV1 153 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 PRR30Q53SZ7 412 aaPredicted RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 TMEM97Q5BJF2 176 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 HES5Q5TA89 166 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 N4BP2L1Q5TBK1 243 aaPredicted RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms