RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 PRRT1Q99946 306 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 ALX4Q9H161 411 aaPredicted RBP11.06□□□□□ -0.64
SNX1-211ENST00000560829 MED28Q9H204 178 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 PIGMQ9H3S5 423 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 RANGRFQ9HD47 186 aaPredicted RBP11.06□□□□□ -0.64
SNX1-211ENST00000560829 SCP2D1Q9UJQ7 156 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 PLEKHA6Q9Y2H5 1048 aa11.06□□□□□ -0.64
SNX1-211ENST00000560829 SNRPGP15A8MWD9 76 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 A8MXE2 369 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 PMELP40967 661 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 RAD52P43351 418 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 RBM11P57052 281 aaKnown RBP11.05□□□□□ -0.64
SNX1-211ENST00000560829 FCN2Q15485 313 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 VAX1Q5SQQ9 334 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 OR52W1Q6IF63 320 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 IDO2Q6ZQW0 420 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 SLC36A1Q7Z2H8 476 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 C6orf201Q7Z4U5 140 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 ZNF573Q86YE8 665 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 MKXQ8IYA7 352 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 SLC6A7Q99884 636 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 TRAF4Q9BUZ4 470 aaPredicted RBP11.05□□□□□ -0.64
SNX1-211ENST00000560829 C1QTNF6Q9BXI9 259 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 BCL2L14Q9BZR8 327 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 PKIBQ9C010 78 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 MYOZ1Q9NP98 299 aaPredicted RBP11.05□□□□□ -0.64
SNX1-211ENST00000560829 ASF1BQ9NVP2 202 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 PLEKHJ1Q9NW61 149 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 ING3Q9NXR8 418 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 ST3GAL6Q9Y274 331 aa11.05□□□□□ -0.64
SNX1-211ENST00000560829 URB1O60287 2271 aaKnown RBP11.05□□□□□ -0.64
SNX1-211ENST00000560829 PRRC2CQ9Y520 2896 aaKnown RBP11.04□□□□□ -0.64
SNX1-211ENST00000560829 A8MV72 311 aaPredicted RBP11.04□□□□□ -0.64
SNX1-211ENST00000560829 GEMIN2O14893 280 aaKnown RBP11.04□□□□□ -0.64
SNX1-211ENST00000560829 HPXP02790 462 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 CA6P23280 308 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 HRH1P35367 487 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 ERVS71-1P61550 626 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 CD83Q01151 205 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 IL24Q13007 206 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 PSG7Q13046 419 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 CBX3Q13185 183 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 DAZAP2Q15038 168 aaPredicted RBP11.04□□□□□ -0.64
SNX1-211ENST00000560829 PIGYQ3MUY2 71 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 FAM76BQ5HYJ3 339 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 OR13C8Q8NGS7 320 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 OR4K15Q8NH41 348 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 KLF14Q8TD94 323 aaPredicted RBP11.04□□□□□ -0.64
SNX1-211ENST00000560829 EMG1Q92979 244 aaKnown RBP11.04□□□□□ -0.64
SNX1-211ENST00000560829 CCDC120Q96HB5 630 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 CYYR1Q96J86 154 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 FYTTD1Q96QD9 318 aaKnown RBP11.04□□□□□ -0.64
SNX1-211ENST00000560829 ACACAQ13085 2346 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 IGHV2OR16-5A0A0B4J2B6 119 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 A0A0G2JNJ9 132 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 TPD52L2O43399 206 aaKnown RBP11.04□□□□□ -0.64
SNX1-211ENST00000560829 PDCD6O75340 191 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 SULT1A3P0DMM9 295 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 SULT1A4P0DMN0 295 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 ANXA7P20073 488 aaKnown RBP11.04□□□□□ -0.64
SNX1-211ENST00000560829 NPBWR2P48146 333 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 FGF12P61328 243 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 PRR30Q53SZ7 412 aaPredicted RBP11.04□□□□□ -0.64
SNX1-211ENST00000560829 SEZ6L2Q6UXD5 910 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 MRGPRGQ86SM5 289 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 BEST4Q8NFU0 473 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 OR10AD1Q8NGE0 317 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 S100PBPQ96BU1 408 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 RTL8AQ9BWD3 113 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 BEX2Q9BXY8 128 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 OR51I2Q9H344 312 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 RHOFQ9HBH0 211 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 BEX1Q9HBH7 125 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 GPN1Q9HCN4 374 aaPredicted RBP11.04□□□□□ -0.64
SNX1-211ENST00000560829 MTCH1Q9NZJ7 389 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 Q9UFV3 132 aa11.04□□□□□ -0.64
SNX1-211ENST00000560829 VSIG10L2P0DP72 767 aa11.03□□□□□ -0.64
SNX1-211ENST00000560829 KITLGP21583 273 aa11.03□□□□□ -0.64
SNX1-211ENST00000560829 MAB21L1Q13394 359 aa11.03□□□□□ -0.64
SNX1-211ENST00000560829 MICBQ29980 383 aa11.03□□□□□ -0.64
SNX1-211ENST00000560829 ZFP69Q49AA0 526 aa11.03□□□□□ -0.64
SNX1-211ENST00000560829 NKAPLQ5M9Q1 402 aa11.03□□□□□ -0.64
SNX1-211ENST00000560829 ZNF626Q68DY1 528 aa11.03□□□□□ -0.64
SNX1-211ENST00000560829 ARRDC1Q8N5I2 433 aa11.03□□□□□ -0.64
SNX1-211ENST00000560829 OR11H7Q8NGC8 314 aa11.03□□□□□ -0.64
SNX1-211ENST00000560829 MICU1Q9BPX6 476 aa11.03□□□□□ -0.64
SNX1-211ENST00000560829 USB1Q9BQ65 265 aaKnown RBP11.03□□□□□ -0.64
SNX1-211ENST00000560829 EDARQ9UNE0 448 aa11.03□□□□□ -0.64
SNX1-211ENST00000560829 J3QT63 122 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 BCL3P20749 454 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 DTYMKP23919 212 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 CALCRP30988 508 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 MPV17P39210 176 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 SNU13P55769 128 aaKnown RBP11.02□□□□□ -0.64
SNX1-211ENST00000560829 TAS2R46P59540 309 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 NAAAQ02083 359 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 RBPJQ06330 500 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 MBNL2Q5VZF2 373 aaKnown RBP11.02□□□□□ -0.64
SNX1-211ENST00000560829 HAGHLQ6PII5 290 aaPredicted RBP11.02□□□□□ -0.64
SNX1-211ENST00000560829 LIX1LQ8IVB5 337 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms