RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 ZNF488Q96MN9 340 aa6.67□□□□□ -1.34
LRRC28-219ENST00000560483 NUDT16L1Q9BRJ7 211 aaKnown RBP6.67□□□□□ -1.34
LRRC28-219ENST00000560483 PCGF1Q9BSM1 259 aa6.67□□□□□ -1.34
LRRC28-219ENST00000560483 CHST5Q9GZS9 411 aa6.67□□□□□ -1.34
LRRC28-219ENST00000560483 FAM192AQ9GZU8 254 aa6.67□□□□□ -1.34
LRRC28-219ENST00000560483 WDR13Q9H1Z4 485 aa6.67□□□□□ -1.34
LRRC28-219ENST00000560483 OR51I2Q9H344 312 aa6.67□□□□□ -1.34
LRRC28-219ENST00000560483 FGF20Q9NP95 211 aaPredicted RBP6.67□□□□□ -1.34
LRRC28-219ENST00000560483 MMP26Q9NRE1 261 aa6.67□□□□□ -1.34
LRRC28-219ENST00000560483 ONECUT1Q9UBC0 465 aa6.67□□□□□ -1.34
LRRC28-219ENST00000560483 NLKQ9UBE8 527 aa6.67□□□□□ -1.34
LRRC28-219ENST00000560483 CLEC2DQ9UHP7 191 aa6.67□□□□□ -1.34
LRRC28-219ENST00000560483 DIMT1Q9UNQ2 313 aaKnown RBP6.67□□□□□ -1.34
LRRC28-219ENST00000560483 CAB39Q9Y376 341 aaPredicted RBP6.67□□□□□ -1.34
LRRC28-219ENST00000560483 ANK3Q12955 4377 aaKnown RBP6.67□□□□□ -1.34
LRRC28-219ENST00000560483 IGHV2-70DA0A0C4DH43 119 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 OR2AT4A6NND4 320 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 SRRM5B3KS81 715 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 E9PI62 339 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 E9PQ18 207 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 F5H0A9 414 aaPredicted RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 TRAPPC2LH3BP13 241 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 SLC1A7O00341 560 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 DVL1O14640 695 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 SYNGR1O43759 233 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 ENSAO43768 121 aaKnown RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 ZFPL1O95159 310 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 PTBP3O95758 552 aaKnown RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 IGLV3-1P01715 115 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 TFF1P04155 84 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 LIMS3P0CW19 117 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 LIMS4P0CW20 117 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 ATF1P18846 271 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 CCL1P22362 96 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 AZGP1P25311 298 aaKnown RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 RBP2P50120 134 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 CCR9P51686 369 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 PPP3R1P63098 170 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 IL13RA1P78552 427 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 UBE2V2Q15819 145 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 METTL11BQ5VVY1 283 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 TEX36Q5VZQ5 186 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 RPL22L1Q6P5R6 122 aaKnown RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 RBMS3Q6XE24 437 aaKnown RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 LHFPL2Q6ZUX7 228 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 SLC25A26Q70HW3 274 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 BTN2A1Q7KYR7 527 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 C11orf53Q8IXP5 236 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 ASCC1Q8N9N2 400 aaKnown RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 PNLDC1Q8NA58 520 aaKnown RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 OR51A4Q8NGJ6 313 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 OR5D18Q8NGL1 313 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 OR5D14Q8NGL3 314 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 OR10AC1Q8NH08 325 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 RAB40AQ8WXH6 277 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 C22orf15Q8WYQ4 148 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 AQP3Q92482 292 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 EMG1Q92979 244 aaKnown RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 SLAMF9Q96A28 289 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 C10orf35Q96D05 121 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 ADAT3Q96EY9 351 aaPredicted RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 CPNE2Q96FN4 548 aaPredicted RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 C1orf159Q96HA4 380 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 MED30Q96HR3 178 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 OPALINQ96PE5 141 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 SPACA5Q96QH8 159 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 S100A13Q99584 98 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 MS4A7Q9GZW8 240 aaPredicted RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 Q9H521 79 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 BABAM2Q9NXR7 383 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 CKLFQ9UBR5 152 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 SLC25A10Q9UBX3 287 aaPredicted RBP6.66□□□□□ -1.34
LRRC28-219ENST00000560483 TPRKBQ9Y3C4 175 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 PCDHGB5Q9Y5G0 923 aa6.66□□□□□ -1.34
LRRC28-219ENST00000560483 SVEP1Q4LDE5 3571 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 TRAV40A0A0B4J280 105 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 PQLC2LA1A4F0 135 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 RFPL4AA6NLU0 287 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 OR4C45A6NMZ5 311 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 RFPL4AL1F8VTS6 287 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 SPRY1O43609 319 aaPredicted RBP6.65□□□□□ -1.34
LRRC28-219ENST00000560483 TCF21O43680 179 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 LHBP01229 141 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 ISG15P05161 165 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 HSMCR30P0CW71 290 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 TMEM225BP0DP42 221 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 CALCBP10092 127 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 JUNBP17275 347 aaPredicted RBP6.65□□□□□ -1.34
LRRC28-219ENST00000560483 RAB3AP20336 220 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 CPT2P23786 658 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 FPR2P25090 351 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 C21orf33P30042 268 aaPredicted RBP6.65□□□□□ -1.34
LRRC28-219ENST00000560483 VHLP40337 213 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 TGM4P49221 684 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 TAS2R43P59537 309 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 SCN1BQ07699 218 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 CDK5R1Q15078 307 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 MED22Q15528 200 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 FBLN7Q53RD9 439 aa6.65□□□□□ -1.34
LRRC28-219ENST00000560483 C6orf141Q5SZD1 244 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms