RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 GPR37O15354 613 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 HOXA3O43365 443 aaPredicted RBP9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 FADS2O95864 444 aaKnown RBP9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 ISG15P05161 165 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 LIMS3P0CW19 117 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 LIMS4P0CW20 117 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 CCR9P51686 369 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 FUT6P51993 359 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 CAV3P56539 151 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 ACTA2P62736 377 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 ACTG2P63267 376 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 RAB40BQ12829 278 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 IL24Q13007 206 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 KLRD1Q13241 179 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 ALKBH1Q13686 389 aaKnown RBP9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 PDCD1Q15116 288 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 ZNF691Q5VV52 312 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 TMEM244Q5VVB8 128 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 PNKDQ8N490 385 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 PIP4P2Q8N4L2 257 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 ZNF555Q8NEP9 628 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 CYGBQ8WWM9 190 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 SLAMF9Q96A28 289 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 RDH12Q96NR8 316 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 PKIBQ9C010 78 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 PRDM13Q9H4Q3 707 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 TNFRSF19Q9NS68 423 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 C19orf12Q9NSK7 152 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 OR14J1Q9UGF5 321 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 POLDIP2Q9Y2S7 368 aa9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 RPL36Q9Y3U8 105 aaKnown RBP9.57□□□□□ -0.88
RABGGTA-216ENST00000560243 A0A0U1RQK1 487 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 A0A1W2PQ09 198 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 A0A1W2PRD5 423 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 A0A1W2PRF3 423 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 A0A1W2PRM7 423 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 RNASEK-C17orf49H0YIS7 233 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 GATBO75879 557 aaKnown RBP9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 ZFPL1O95159 310 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 SERPINA3P01011 423 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 RNASE1P07998 156 aaKnown RBP9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 ATF1P18846 271 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 ETV1P50549 477 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 GTF2A1P52655 376 aaPredicted RBP9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 CAPZA1P52907 286 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 ADARB1P78563 741 aaKnown RBP9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 C12orf54Q6X4T0 127 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 SLC25A26Q70HW3 274 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 SYS1Q8N2H4 156 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 KIR3DL3Q8N743 410 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 ZNF676Q8N7Q3 588 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 CCDC54Q8NEL0 328 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 OR13C3Q8NGS6 347 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 GATAD2BQ8WXI9 593 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 PP6455Q8WZ26 134 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 TNFRSF14Q92956 283 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 ZDHHC16Q969W1 377 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 C10orf35Q96D05 121 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 SPACA5Q96QH8 159 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 FGF20Q9NP95 211 aaPredicted RBP9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 IL36RNQ9UBH0 155 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 HHLA2Q9UM44 414 aa9.56□□□□□ -0.88
RABGGTA-216ENST00000560243 MEX3AA1L020 520 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 CLDN34H7C241 214 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 MELTFP08582 738 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 GNAO1P09471 354 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 CALCBP10092 127 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 ZNF20P17024 532 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 AZGP1P25311 298 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 NPBWR2P48146 333 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 COMPP49747 757 aaPredicted RBP9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 BPIFB3P59826 476 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 CNN3Q15417 329 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 KLHL22Q53GT1 634 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 XAF1Q6GPH4 301 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 CRIP3Q6Q6R5 217 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 Q6YL49 198 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 UTS2BQ765I0 119 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 CMTM4Q8IZR5 234 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 FAM185AQ8N0U4 392 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 ZNF561Q8N587 486 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 OR4M1Q8NGD0 313 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 SLC25A28Q96A46 364 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 RFT1Q96AA3 541 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 BORCS8Q96FH0 119 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 CEP19Q96LK0 163 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 PDCD1LG2Q9BQ51 273 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 INPP5EQ9NRR6 644 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 RBFOX1Q9NWB1 397 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 DSCAML1Q8TD84 2053 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 PKD1L1Q8TDX9 2849 aa9.55□□□□□ -0.88
RABGGTA-216ENST00000560243 TRBV23-1A0A0A0MS06 115 aa9.54□□□□□ -0.88
RABGGTA-216ENST00000560243 HAX1O00165 279 aa9.54□□□□□ -0.88
RABGGTA-216ENST00000560243 SLC1A7O00341 560 aa9.54□□□□□ -0.88
RABGGTA-216ENST00000560243 SPRY1O43609 319 aaPredicted RBP9.54□□□□□ -0.88
RABGGTA-216ENST00000560243 ANGPTL7O43827 346 aa9.54□□□□□ -0.88
RABGGTA-216ENST00000560243 KNG1P01042 644 aa9.54□□□□□ -0.88
RABGGTA-216ENST00000560243 TK1P04183 234 aa9.54□□□□□ -0.88
RABGGTA-216ENST00000560243 HKR1P10072 659 aa9.54□□□□□ -0.88
RABGGTA-216ENST00000560243 BCL3P20749 454 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms