RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 PKIBQ9C010 78 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 NPFFR1Q9GZQ6 430 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 NEK6Q9HC98 313 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 FBLN5Q9UBX5 448 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 COPS3Q9UNS2 423 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 V9GYS6 101 aa10.28□□□□□ -0.76
SNX1-209ENST00000559961 PQLC2LA1A4F0 135 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 METTL15A6NJ78 407 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 SNTNA6NMZ2 147 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 ZAR1LA6NP61 321 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 SYNGR1O43759 233 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 SULT1C4O75897 302 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 COX7A1P24310 79 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 FUT6P51993 359 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 MFGE8Q08431 387 aaPredicted RBP10.27□□□□□ -0.77
SNX1-209ENST00000559961 TMED1Q13445 227 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 CNN3Q15417 329 aaKnown RBP10.27□□□□□ -0.77
SNX1-209ENST00000559961 LY6EQ16553 131 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 ODF4Q2M2E3 257 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 ARSJQ5FYB0 599 aaPredicted RBP10.27□□□□□ -0.77
SNX1-209ENST00000559961 TMEM200BQ69YZ2 307 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 ASPHD2Q6ICH7 369 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 MKXQ8IYA7 352 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 Q8IYB0 196 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 ENTHD1Q8IYW4 607 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 PPP1R35Q8TAP8 253 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 FAM110DQ8TAY7 271 aaPredicted RBP10.27□□□□□ -0.77
SNX1-209ENST00000559961 TRMT10AQ8TBZ6 339 aaKnown RBP10.27□□□□□ -0.77
SNX1-209ENST00000559961 PPP1R14AQ96A00 147 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 FOXRED1Q96CU9 486 aaPredicted RBP10.27□□□□□ -0.77
SNX1-209ENST00000559961 BORCS8Q96FH0 119 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 ZNF488Q96MN9 340 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 TBX5Q99593 518 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 OSBPL10Q9BXB5 764 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 FGF23Q9GZV9 251 aaPredicted RBP10.27□□□□□ -0.77
SNX1-209ENST00000559961 MEGF9Q9H1U4 602 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 RIBC2Q9H4K1 309 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 ADGRL4Q9HBW9 690 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 C19orf12Q9NSK7 152 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 IMPAD1Q9NX62 359 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 ZNF222Q9UK12 451 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 PITPNC1Q9UKF7 332 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 SLC22A13Q9Y226 551 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 PCDHGB5Q9Y5G0 923 aa10.27□□□□□ -0.77
SNX1-209ENST00000559961 A6NIN4 97 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 MITFO75030 526 aaPredicted RBP10.26□□□□□ -0.77
SNX1-209ENST00000559961 IGLV3-1P01715 115 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 TK1P04183 234 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 PIPP12273 146 aaPredicted RBP10.26□□□□□ -0.77
SNX1-209ENST00000559961 HTR1FP30939 366 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 ATP1B3P54709 279 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 DLX1P56177 255 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 EDDM3BP56851 147 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 OR12D2P58182 307 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 IL24Q13007 206 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 DYNC1I2Q13409 638 aaKnown RBP10.26□□□□□ -0.77
SNX1-209ENST00000559961 HERPUD1Q15011 391 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 AADACL4Q5VUY2 407 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 C12orf73Q69YU5 71 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 BCDIN3DQ7Z5W3 292 aaKnown RBP10.26□□□□□ -0.77
SNX1-209ENST00000559961 ANGPTL5Q86XS5 388 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 EGFL6Q8IUX8 553 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 CD177Q8N6Q3 437 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 OR8J1Q8NGP2 316 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 OR14K1Q8NGZ2 314 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 SLC7A6OSQ96CW6 309 aaPredicted RBP10.26□□□□□ -0.77
SNX1-209ENST00000559961 C10orf35Q96D05 121 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 CEP19Q96LK0 163 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 NKX3-1Q99801 234 aaPredicted RBP10.26□□□□□ -0.77
SNX1-209ENST00000559961 NRIP2Q9BQI9 281 aa10.26□□□□□ -0.77
SNX1-209ENST00000559961 CADM1Q9BY67 442 aaKnown RBP10.26□□□□□ -0.77
SNX1-209ENST00000559961 RANBP3Q9H6Z4 567 aaPredicted RBP10.26□□□□□ -0.77
SNX1-209ENST00000559961 MRM2Q9UI43 246 aaKnown RBP10.26□□□□□ -0.77
SNX1-209ENST00000559961 MGAM2Q2M2H8 2515 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 hADV38S2A0JD32 116 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 MAGEB4O15481 346 aaPredicted RBP10.25□□□□□ -0.77
SNX1-209ENST00000559961 INMTO95050 263 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 ARG1P05089 322 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 UBCP0CG48 685 aaKnown RBP10.25□□□□□ -0.77
SNX1-209ENST00000559961 ZNF20P17024 532 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 PEX2P28328 305 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 KIR2DS4P43632 304 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 COL10A1Q03692 680 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 TMEM42Q69YG0 159 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 KDM4DQ6B0I6 523 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 ZBTB49Q6ZSB9 765 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 KCTD20Q7Z5Y7 419 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 BATF2Q8N1L9 274 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 CAPSLQ8WWF8 208 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 PP6455Q8WZ26 134 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 RORBQ92753 470 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 CENPNQ96H22 339 aaPredicted RBP10.25□□□□□ -0.77
SNX1-209ENST00000559961 GNG8Q9UK08 70 aa10.25□□□□□ -0.77
SNX1-209ENST00000559961 A0A1B0GTI1 187 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 A0A1W2PQL4 384 aaPredicted RBP10.24□□□□□ -0.77
SNX1-209ENST00000559961 FUOMA2VDF0 154 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 K7N7A8 449 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 M0R129 80 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 RBP4P02753 201 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 ALDOBP05062 364 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms