RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 NAAAQ02083 359 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 RNPS1Q15287 305 aaKnown RBP7.02□□□□□ -1.29
SMAD3-212ENST00000559937 PABPC1L2AQ5JQF8 200 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 TSPO2Q5TGU0 170 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 ALKAL2Q6UX46 152 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 CLEC18BQ6UXF7 455 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 KCTD9Q7L273 389 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 OSR2Q8N2R0 312 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 TMEM251Q8N6I4 163 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 INO80EQ8NBZ0 244 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-212ENST00000559937 MDS2Q8NDY4 140 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 OR2AE1Q8NHA4 323 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 STOML3Q8TAV4 291 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 ABHD3Q8WU67 409 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 ZNF775Q96BV0 537 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-212ENST00000559937 ZNF845Q96IR2 970 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-212ENST00000559937 SIGLEC12Q96PQ1 595 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 VRK1Q99986 396 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-212ENST00000559937 ST6GALNAC5Q9BVH7 336 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 TTTY12Q9BZ98 90 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 GP6Q9HCN6 339 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 ACKR4Q9NPB9 350 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 C1orf123Q9NWV4 160 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 RASL12Q9NYN1 266 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 DNAJB11Q9UBS4 358 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 ZNF230Q9UIE0 474 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-212ENST00000559937 ANXA10Q9UJ72 324 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 CEP295Q9C0D2 2601 aa7.02□□□□□ -1.29
SMAD3-212ENST00000559937 IGKV1-27A0A075B6S5 117 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 FAM230AA0A1W2PPH8 454 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 A8MXK9 166 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 SS18L1O75177 396 aaPredicted RBP7.01□□□□□ -1.29
SMAD3-212ENST00000559937 PDCD6O75340 191 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 SP1P08047 785 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 FGF2P09038 288 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 EDN3P14138 238 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 PGAM2P15259 253 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 RPS2P15880 293 aaKnown RBP7.01□□□□□ -1.29
SMAD3-212ENST00000559937 GABRR1P24046 479 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 ITGA3P26006 1051 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 CD82P27701 267 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 NUP62P37198 522 aaPredicted RBP7.01□□□□□ -1.29
SMAD3-212ENST00000559937 SOX8P57073 446 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 ARPC4P59998 168 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 ARF1P84077 181 aaKnown RBP7.01□□□□□ -1.29
SMAD3-212ENST00000559937 PLGLB1Q02325 96 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 ZNF92Q03936 586 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 PDZK1IP1Q13113 114 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 SRSF7Q16629 238 aaKnown RBP eCLIP7.01□□□□□ -1.292e-9■■■□□ 16.9
SMAD3-212ENST00000559937 CCDC157Q569K6 752 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 C1QTNF12Q5T7M4 302 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 PLCXD3Q63HM9 321 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 SIGIRRQ6IA17 410 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 SPINK14Q6IE38 97 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 RPUSD3Q6P087 351 aaKnown RBP7.01□□□□□ -1.29
SMAD3-212ENST00000559937 PRSS54Q6PEW0 395 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 MOB3CQ70IA8 216 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 C6orf201Q7Z4U5 140 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 TMEM200AQ86VY9 491 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 FGFBP3Q8TAT2 258 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 APOBEC3DQ96AK3 386 aaPredicted RBP7.01□□□□□ -1.29
SMAD3-212ENST00000559937 C2orf50Q96LR7 162 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 ARPC5LQ9BPX5 153 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 CMSS1Q9BQ75 279 aaKnown RBP7.01□□□□□ -1.29
SMAD3-212ENST00000559937 TMEM9BQ9NQ34 198 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 SLC7A10Q9NS82 523 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 NECAP2Q9NVZ3 263 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 SDHAF2Q9NX18 166 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 MEMO1Q9Y316 297 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 CACNA1BQ00975 2339 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 RTTNQ86VV8 2226 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 FREM1Q5H8C1 2179 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 MED13Q9UHV7 2174 aa7.01□□□□□ -1.29
SMAD3-212ENST00000559937 CRYM-AS1A6NIL9 109 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 FAM25EA8MYX2 175 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 EEF1E1-BLOC1S5C9J1V9 151 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 F8VVB4 439 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 F8VWA3 439 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 SPRY1O43609 319 aaPredicted RBP7□□□□□ -1.29
SMAD3-212ENST00000559937 SPDEFO95238 335 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 CST4P01036 141 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 IFNA2P01563 188 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 RLN2P04090 185 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 FCGR3AP08637 254 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 TPT1P13693 172 aaKnown RBP7□□□□□ -1.29
SMAD3-212ENST00000559937 CD46P15529 392 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 FUT3P21217 361 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 RBMXP38159 391 aaKnown RBP7□□□□□ -1.29
SMAD3-212ENST00000559937 ID4P47928 161 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 MEOX1P50221 254 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 UCP3P55916 312 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 RBM11P57052 281 aaKnown RBP7□□□□□ -1.29
SMAD3-212ENST00000559937 MALLQ13021 153 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 IL15RAQ13261 267 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 HES3Q5TGS1 186 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 ELP2Q6IA86 826 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 TMEM211Q6ICI0 200 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 DHRS11Q6UWP2 260 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 Q6ZS49 121 aa7□□□□□ -1.29
SMAD3-212ENST00000559937 GLRX5Q86SX6 157 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms