RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 APLNRP35414 380 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 GCLMP48507 274 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 PSMB2P49721 201 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 CDKN2DP55273 166 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 ACTBP60709 375 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 ACTG1P63261 375 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 IFITM3Q01628 133 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 NAB1Q13506 487 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 TMEM236Q5W0B7 351 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 FBXW9Q5XUX1 488 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 LAMTOR1Q6IAA8 161 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 DNAJC24Q6P3W2 148 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 DNM1P34Q6PK57 102 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 LRRC34Q8IZ02 419 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 CEND1Q8N111 149 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 C20orf203Q8NBC4 194 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 CCDC112Q8NEF3 446 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 OR52E4Q8NGH9 312 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 OR13G1Q8NGZ3 307 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 RXFP4Q8TDU9 374 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 BLNKQ8WV28 456 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 FAM104AQ969W3 186 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 PTH2Q96A98 100 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 C16orf74Q96GX8 76 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 OR10C1Q96KK4 312 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 CEP170P1Q96L14 293 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 BIRC8Q96P09 236 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 RBP7Q96R05 134 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 METTL26Q96S19 204 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 PLEKHF1Q96S99 279 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 TRIM45Q9H8W5 580 aaPredicted RBP2.46□□□□□ -2.02
SPG11-218ENST00000559754 FBXO6Q9NRD1 293 aaPredicted RBP2.46□□□□□ -2.02
SPG11-218ENST00000559754 FGFR1OP2Q9NVK5 253 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 RPS6KB2Q9UBS0 482 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 C9orf84Q5VXU9 1444 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 DNASE2O00115 360 aaPredicted RBP2.45□□□□□ -2.02
SPG11-218ENST00000559754 CCRL2O00421 344 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 MANBAO00462 879 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 GPR171O14626 319 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 BIRC5O15392 142 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 SSNA1O43805 119 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 NDUFS5O43920 106 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 SUPT3HO75486 399 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 RP2O75695 350 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 SLC22A5O76082 557 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 IGLV2-23P01705 113 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 SLC2A1P11166 492 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 MLNP12872 115 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 ZNF32P17041 273 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 PPOXP50336 477 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 ZNF133P52736 654 aaPredicted RBP2.45□□□□□ -2.02
SPG11-218ENST00000559754 ARG2P78540 354 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 LAMTOR4Q0VGL1 99 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 MLLT11Q13015 90 aaPredicted RBP2.45□□□□□ -2.02
SPG11-218ENST00000559754 HERPUD1Q15011 391 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 TMEM183BQ1AE95 376 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 LPCAT4Q643R3 524 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 KDM4DQ6B0I6 523 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 FAM183BPQ6ZVS7 135 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 SLC13A5Q86YT5 568 aaPredicted RBP2.45□□□□□ -2.02
SPG11-218ENST00000559754 TMEM183AQ8IXX5 376 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 BLIDQ8IZY5 108 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 ABHD3Q8WU67 409 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 MRPL48Q96GC5 212 aaKnown RBP2.45□□□□□ -2.02
SPG11-218ENST00000559754 KCTD7Q96MP8 289 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 OR2M2Q96R28 347 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 SAMD10Q9BYL1 202 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 ARL6Q9H0F7 186 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 MFSD1Q9H3U5 465 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 MMP26Q9NRE1 261 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 PLSCR3Q9NRY6 295 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 RBFOX1Q9NWB1 397 aaKnown RBP2.45□□□□□ -2.02
SPG11-218ENST00000559754 TAS2R13Q9NYV9 303 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 TAS2R9Q9NYW1 312 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 C3orf18Q9UK00 162 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 TP53TG1Q9Y2A0 90 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 CARMIL3Q8ND23 1372 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 ABCC11Q96J66 1382 aa2.45□□□□□ -2.02
SPG11-218ENST00000559754 ASTN1O14525 1302 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 RIMS2Q9UQ26 1411 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 UPK2O00526 184 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 MAGEB4O15481 346 aaPredicted RBP2.44□□□□□ -2.02
SPG11-218ENST00000559754 ENTPD6O75354 484 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 REM1O75628 298 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 GABARAPO95166 117 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 CTDNEP1O95476 244 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 ASS1P00966 412 aaKnown RBP2.44□□□□□ -2.02
SPG11-218ENST00000559754 SSTR5P35346 364 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 POLR2IP36954 125 aaKnown RBP2.44□□□□□ -2.02
SPG11-218ENST00000559754 NMUP48645 174 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 RAP1GDS1P52306 607 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 AP2S1P53680 142 aaPredicted RBP2.44□□□□□ -2.02
SPG11-218ENST00000559754 GFERP55789 205 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 CLDN12P56749 244 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 AP3S2P59780 193 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 RPL23P62829 140 aaKnown RBP2.44□□□□□ -2.02
SPG11-218ENST00000559754 FAM3AP98173 230 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 PNOCQ13519 176 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 IRF4Q15306 451 aa2.44□□□□□ -2.02
SPG11-218ENST00000559754 SHHQ15465 462 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms