RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 DMTNQ08495 405 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ZNF616Q08AN1 781 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 EIF4EBP2Q13542 120 aaPredicted RBP0.94□□□□□ -2.26
USP3-209ENST00000558925 TPBGQ13641 420 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 LY6EQ16553 131 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 SP6Q3SY56 376 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ACTBL2Q562R1 376 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 SYT6Q5T7P8 510 aaPredicted RBP0.94□□□□□ -2.26
USP3-209ENST00000558925 MFSD14CQ5VZR4 134 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 AP1ARQ63HQ0 302 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ZNF470Q6ECI4 717 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 UNQ9165/PRO28630Q6UXU0 137 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 Q6ZT83 130 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ERO1BQ86YB8 467 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ITPRIPQ8IWB1 547 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 NELFCDQ8IXH7 590 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 CCNYL1Q8N7R7 359 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ZNF615Q8N8J6 731 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 TMEM105Q8N8V8 129 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 DRAXINQ8NBI3 349 aaPredicted RBP0.94□□□□□ -2.26
USP3-209ENST00000558925 OR2K2Q8NGT1 345 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 OR6K2Q8NGY2 324 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 OR1S1Q8NH92 325 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ZFAND1Q8TCF1 268 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 SFXN5Q8TD22 340 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 DOK4Q8TEW6 326 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 C17orf50Q8WW18 174 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 TMEM239Q8WW34 195 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 C22orf15Q8WYQ4 148 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 FXYD5Q96DB9 178 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 SNF8Q96H20 258 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 SMIM8Q96KF7 97 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ATP6V1G3Q96LB4 118 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 GPR82Q96P67 336 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 DERL3Q96Q80 235 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 DOK1Q99704 481 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 CIB1Q99828 191 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 CHCHD7Q9BUK0 85 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 MS4A8Q9BY19 250 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ZSCAN16Q9H4T2 348 aaPredicted RBP0.94□□□□□ -2.26
USP3-209ENST00000558925 POMKQ9H5K3 350 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 DHX35Q9H5Z1 703 aaKnown RBP0.94□□□□□ -2.26
USP3-209ENST00000558925 SPACA1Q9HBV2 294 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 TMBIM4Q9HC24 238 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 MS4A12Q9NXJ0 267 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 MAT2BQ9NZL9 334 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 VAPAQ9P0L0 249 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ENOPH1Q9UHY7 261 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 RAB22AQ9UL26 194 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 KLF13Q9Y2Y9 288 aaPredicted RBP0.94□□□□□ -2.26
USP3-209ENST00000558925 ACOT9Q9Y305 439 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ZNF706Q9Y5V0 76 aaPredicted RBP0.94□□□□□ -2.26
USP3-209ENST00000558925 PTPRTO14522 1441 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 SLIT3O75094 1523 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 SCN4AP35499 1836 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 KIAA1671Q9BY89 1806 aa0.94□□□□□ -2.26
USP3-209ENST00000558925 ELP1O95163 1332 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 SEC16AO15027 2179 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 IGKV2-28A0A075B6P5 120 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 A0A1B0GXF2 115 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 TMEM72A0PK05 275 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 TMEM150BA6NC51 233 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 ZNF233A6NK53 670 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 CEACAM18A8MTB9 384 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 IQCF5A8MTL0 148 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 HSBP1L1C9JCN9 74 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 F8VP50 259 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 H3BP45 60 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 RPL36A-HNRNPH2H7BZ11 118 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 CLDN34H7C241 214 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 M0QXV9 152 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 UPK1AO00322 258 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 GATCO43716 136 aaKnown RBP0.93□□□□□ -2.26
USP3-209ENST00000558925 CNMDO75829 334 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 CDRT1O95170 752 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 TNFAIP8O95379 198 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 LDOC1O95751 146 aaPredicted RBP0.93□□□□□ -2.26
USP3-209ENST00000558925 IGKV2D-28P01615 120 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 IL4P05112 153 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 SLC35E2BP0CK96 405 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 HLA-GP17693 338 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 IL1RNP18510 177 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 NELFEP18615 380 aaKnown RBP0.93□□□□□ -2.26
USP3-209ENST00000558925 TAC1P20366 129 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 PCK1P35558 622 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 UGT2B10P36537 528 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 PMELP40967 661 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 CD151P48509 253 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 KCNJ3P48549 501 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 MEF2CQ06413 473 aaPredicted RBP0.93□□□□□ -2.26
USP3-209ENST00000558925 PMS2P3Q13401 168 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 TRAM1Q15629 374 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 ZBTB6Q15916 424 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 TMEM241Q24JQ0 296 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 CEACAM16Q2WEN9 425 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 KRTAP21-2Q3LI59 83 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 OR10J3Q5JRS4 329 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 ZNF678Q5SXM1 525 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 TBPL2Q6SJ96 375 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 FAM131AQ6UXB0 335 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms