RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 CCL1P22362 96 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 KIR3DL2P43630 455 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 EFNB2P52799 333 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 CAPZA1P52907 286 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 ESRRGP62508 458 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 ACSM1Q08AH1 577 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 BNIP1Q12981 228 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 UBE2V2Q15819 145 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 ZBTB37Q5TC79 503 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 NCR3LG1Q68D85 454 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 CATSPERDQ86XM0 798 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 PRSS35Q8N3Z0 413 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 C11orf44Q8N8P7 122 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 ZNF671Q8TAW3 534 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 FAM110DQ8TAY7 271 aaPredicted RBP10.99□□□□□ -0.65
VPS18-203ENST00000558855 DNAJC9Q8WXX5 260 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 UBE2FQ969M7 185 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 CLN6Q9NWW5 311 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 OR14J1Q9UGF5 321 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 TMEM14AQ9Y6G1 99 aa10.99□□□□□ -0.65
VPS18-203ENST00000558855 A0A1W2PQL4 384 aaPredicted RBP10.98□□□□□ -0.65
VPS18-203ENST00000558855 ZNF670-ZNF695F2Z2N8 137 aa10.98□□□□□ -0.65
VPS18-203ENST00000558855 TIMM23O14925 209 aa10.98□□□□□ -0.65
VPS18-203ENST00000558855 ZNF737O75373 536 aa10.98□□□□□ -0.65
VPS18-203ENST00000558855 INMTO95050 263 aa10.98□□□□□ -0.65
VPS18-203ENST00000558855 PAHP00439 452 aa10.98□□□□□ -0.65
VPS18-203ENST00000558855 RPL31P62899 125 aaKnown RBP10.98□□□□□ -0.65
VPS18-203ENST00000558855 ZNF85Q03923 595 aa10.98□□□□□ -0.65
VPS18-203ENST00000558855 HABP2Q14520 560 aaPredicted RBP10.98□□□□□ -0.65
VPS18-203ENST00000558855 SMIM21Q3B7S5 101 aa10.98□□□□□ -0.65
VPS18-203ENST00000558855 PLA1AQ53H76 456 aa10.98□□□□□ -0.65
VPS18-203ENST00000558855 CCBE1Q6UXH8 406 aaPredicted RBP10.98□□□□□ -0.65
VPS18-203ENST00000558855 RASL12Q9NYN1 266 aa10.98□□□□□ -0.65
VPS18-203ENST00000558855 MTCH1Q9NZJ7 389 aa10.98□□□□□ -0.65
VPS18-203ENST00000558855 CAB39Q9Y376 341 aaPredicted RBP10.98□□□□□ -0.65
VPS18-203ENST00000558855 FAM230AA0A1W2PPH8 454 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 TMEM82A0PJX8 343 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 G3V2T6 193 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 DLGAP1O14490 977 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 NXPH2O95156 264 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 TK1P04183 234 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 CALCBP10092 127 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 TGFBR2P37173 567 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 RAB13P51153 203 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 ISL1P61371 349 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 COL10A1Q03692 680 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 LRRC75BQ2VPJ9 315 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 FBLN7Q53RD9 439 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 RDH10Q8IZV5 341 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 LYG1Q8N1E2 194 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 ZNF561Q8N587 486 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 OR2T27Q8NH04 317 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 OR5R1Q8NH85 324 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 SLAMF9Q96A28 289 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 MEGF9Q9H1U4 602 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 MOB1AQ9H8S9 216 aa10.97□□□□□ -0.65
VPS18-203ENST00000558855 IGKV1-9A0A0C4DH69 117 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 BTBD17A6NE02 478 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 ANKRD61A6NGH8 418 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 FAM90A8PA6NJQ4 464 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 C17orf98A8MV24 154 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 ODF3BA8MYP8 253 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 IGHA1P01876 353 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 HOXB6P17509 224 aaKnown RBP10.96□□□□□ -0.65
VPS18-203ENST00000558855 GABRA5P31644 462 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 TP53I3Q53FA7 332 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 BAIAP2L2Q6UXY1 529 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 Q6ZS46 218 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 ZNF573Q86YE8 665 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 TPRX1Q8N7U7 411 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 YIPF7Q8N8F6 280 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 OR52N4Q8NGI2 321 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 OR5D13Q8NGL4 314 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 EME1Q96AY2 570 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 TEX12Q9BXU0 123 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 ZNF702PQ9H963 129 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 FBLN5Q9UBX5 448 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 AASSQ9UDR5 926 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 SF3B6Q9Y3B4 125 aaKnown RBP10.96□□□□□ -0.65
VPS18-203ENST00000558855 SNX5Q9Y5X3 404 aa10.96□□□□□ -0.65
VPS18-203ENST00000558855 LOC107986453A0A1B0GWG9 222 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 SAC3D1A6NKF1 404 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 K7N7A8 449 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 SLC1A7O00341 560 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 DYNC1I1O14576 645 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 MMP23AO75900 390 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 HTR1FP30939 366 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 NPBWR2P48146 333 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 IL24Q13007 206 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 BLMHQ13867 455 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 KIAA2026Q5HYC2 2103 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 GID4Q8IVV7 300 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 KLHDC1Q8N7A1 406 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 OR10AC1Q8NH08 325 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 ADAT3Q96EY9 351 aaPredicted RBP10.95□□□□□ -0.66
VPS18-203ENST00000558855 GABARAPL3Q9BY60 117 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 PKIBQ9C010 78 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 RIBC2Q9H4K1 309 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 OAZ3Q9UMX2 235 aa10.95□□□□□ -0.66
VPS18-203ENST00000558855 AP4S1Q9Y587 144 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms