RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 CAV3P56539 151 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 GMFBP60983 142 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 PPP3R1P63098 170 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 METTL11BQ5VVY1 283 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 ZNF788Q6ZQV5 615 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 RPS4Y2Q8TD47 263 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 NPRL2Q8WTW4 380 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 GATAD2BQ8WXI9 593 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 CEP19Q96LK0 163 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 CCL13Q99616 98 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 PDCD1LG2Q9BQ51 273 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 NRIP2Q9BQI9 281 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 SUCNR1Q9BXA5 334 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 MMP26Q9NRE1 261 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 CTSZQ9UBR2 303 aa13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 SLC25A10Q9UBX3 287 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-205ENST00000558534 TRBV23-1A0A0A0MS06 115 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 XPNPEP2O43895 674 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 CD1AP06126 327 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 CDK1P06493 297 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 HCKP08631 526 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 EPHA1P21709 976 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 MAPK3P27361 379 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 PAX2Q02962 417 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 HNRNPA0Q13151 305 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 OR2G6Q5TZ20 316 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 BTN2A1Q7KYR7 527 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 SAXO1Q8IYX7 474 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 BPIFB2Q8N4F0 458 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 OR13C9Q8NGT0 318 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 SDSLQ96GA7 329 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 FAM234AQ9H0X4 552 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 WDR13Q9H1Z4 485 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 SEBOXQ9HB31 216 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 HES4Q9HCC6 221 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 SNTG1Q9NSN8 517 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 FKBP14Q9NWM8 211 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 NUP50Q9UKX7 468 aa13.12□□□□□ -0.31
RABGGTA-205ENST00000558534 MXRA5Q9NR99 2828 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 SVEP1Q4LDE5 3571 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 ZNF879B4DU55 563 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 E9PI62 339 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 SYNGR1O43759 233 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 PSG2P11465 335 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 CAPZA1P52907 286 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 IKZF1Q13422 519 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 BLMHQ13867 455 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 PDCD1Q15116 288 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 RBMS3Q6XE24 437 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 USP43Q70EL4 1123 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 SLC25A26Q70HW3 274 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 CALHM1Q8IU99 346 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 KIR3DL3Q8N743 410 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 NANOGP1Q8N7R0 232 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 ZSCAN4Q8NAM6 433 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 OR5T2Q8NGG2 359 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 OR51A4Q8NGJ6 313 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 PPP1R35Q8TAP8 253 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 TMEM106AQ96A25 262 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 UPRTQ96BW1 309 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 GAFA1Q96PS6 74 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 CDCA4Q9BXL8 241 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 OCEL1Q9H607 264 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 CNTD2Q9H8S5 307 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 RPUSD1Q9UJJ7 312 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 KPTNQ9Y664 436 aa13.11□□□□□ -0.31
RABGGTA-205ENST00000558534 hCG_1809904A0A1W2PP81 198 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 A0A1W2PPE2 198 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 A0A1W2PR64 198 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 A0A1W2PRV1 198 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 PTGES3LE9PB15 166 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 CHRM2P08172 466 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 NDUFB7P17568 137 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 PRDX2P32119 198 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 POU3F4P49335 361 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 GTF2A1P52655 376 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 ERVK11-1P61568 191 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 ACSM1Q08AH1 577 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 Q499Y3 187 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 DMRTC1Q5HYR2 192 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 SPIN3Q5JUX0 258 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 RBM48Q5RL73 367 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 GPR157Q5UAW9 335 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 DMKNQ6E0U4 476 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 ANGPTL5Q86XS5 388 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 FAM216BQ8N7L0 139 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 TMEM185AQ8NFB2 350 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 TMEM158Q8WZ71 300 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 H1FXQ92522 213 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 EMG1Q92979 244 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 DACT3Q96B18 629 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 GPER1Q99527 375 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 DCTN5Q9BTE1 182 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 SMURF1Q9HCE7 757 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 PCDHB16Q9NRJ7 776 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 OPN4Q9UHM6 478 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 CLEC2DQ9UHP7 191 aa13.1□□□□□ -0.31
RABGGTA-205ENST00000558534 IGKV1D-17A0A075B6S4 117 aa13.09□□□□□ -0.31
RABGGTA-205ENST00000558534 RFPL4AA6NLU0 287 aa13.09□□□□□ -0.31
RABGGTA-205ENST00000558534 C22orf46C9J442 243 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms