RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SERPINE3A8MV23 424 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 F8VVB4 439 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 F8VWA3 439 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 LILRA1O75019 489 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 GLI4P10075 376 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 RAB14P61106 215 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 SUPT4H1P63272 117 aaKnown RBP9.12□□□□□ -0.95
TPM1-210ENST00000558264 PDZK1IP1Q13113 114 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 ZMYND11Q15326 602 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 ANKRD55Q3KP44 614 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 TMEM42Q69YG0 159 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 GSG1LQ6UXU4 331 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 ARRDC1Q8N5I2 433 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 ZSCAN4Q8NAM6 433 aaPredicted RBP9.12□□□□□ -0.95
TPM1-210ENST00000558264 SLAMF9Q96A28 289 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 MARS2Q96GW9 593 aaKnown RBP9.12□□□□□ -0.95
TPM1-210ENST00000558264 WDYHV1Q96HA8 205 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 IP6K3Q96PC2 410 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 LINC00470Q9BZP3 86 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 WDR13Q9H1Z4 485 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 LIME1Q9H400 295 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 BCO1Q9HAY6 547 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 ACKR4Q9NPB9 350 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 COMMD9Q9P000 198 aa9.12□□□□□ -0.95
TPM1-210ENST00000558264 IGHV3-64DA0A0J9YX35 117 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 XRCC2O43543 280 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 OR7C1O76099 320 aaPredicted RBP9.11□□□□□ -0.95
TPM1-210ENST00000558264 DUS4LO95620 317 aaKnown RBP9.11□□□□□ -0.95
TPM1-210ENST00000558264 DUSP1P28562 367 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 SOX8P57073 446 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 PRDX4Q13162 271 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 CLN3Q13286 438 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 TSC22D1Q15714 1073 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 FAM189A2Q15884 450 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 FAM74A1Q5RGS3 127 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 MRPL21Q7Z2W9 205 aaKnown RBP9.11□□□□□ -0.95
TPM1-210ENST00000558264 OSR2Q8N2R0 312 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 RELL2Q8NC24 303 aaPredicted RBP9.11□□□□□ -0.95
TPM1-210ENST00000558264 TOMM40LQ969M1 308 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 DMRTA2Q96SC8 542 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 CMSS1Q9BQ75 279 aaKnown RBP9.11□□□□□ -0.95
TPM1-210ENST00000558264 SLX1AQ9BQ83 275 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 GSX2Q9BZM3 304 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 OSGIN2Q9Y236 505 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 SVILO95425 2214 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 SLC22A20A6NK97 555 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 I3L521 148 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 IL18BPO95998 194 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 RLN2P04090 185 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 AGTR1P30556 359 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 CBX5P45973 191 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 HAAOP46952 286 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 FUT6P51993 359 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 FXYD4P59646 89 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 ACTBL2Q562R1 376 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 ESCO2Q56NI9 601 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 TMEM128Q5BJH2 165 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 TOR2AQ5JU69 321 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 C11orf87Q6NUJ2 197 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 OVCH2Q7RTZ1 564 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 TMEM17Q86X19 198 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 PRDM14Q9GZV8 571 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 MBD2Q9UBB5 411 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 ZNF318Q5VUA4 2279 aa9.11□□□□□ -0.95
TPM1-210ENST00000558264 LINC00862A6NCI5 91 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 HOXB5P09067 269 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 ZNF250P15622 560 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 FPR2P25090 351 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 CHATP28329 748 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 TNFSF10P50591 281 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 TAS2R46P59540 309 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 NHLRC3Q5JS37 347 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 CLLU1Q5K131 121 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 MYPOPQ86VE0 399 aaPredicted RBP9.1□□□□□ -0.95
TPM1-210ENST00000558264 LHFPL1Q86WI0 220 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 OR5M9Q8NGP3 310 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 HPSE2Q8WWQ2 592 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 CCDC120Q96HB5 630 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 ZNF488Q96MN9 340 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 ZNF75AQ96N20 296 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 VRK1Q99986 396 aaPredicted RBP9.1□□□□□ -0.95
TPM1-210ENST00000558264 RGCCQ9H4X1 137 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 TMA7Q9Y2S6 64 aaKnown RBP9.1□□□□□ -0.95
TPM1-210ENST00000558264 MGAQ8IWI9 3026 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 ZNF724A8MTY0 619 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 CD8AP01732 235 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 FCGR3AP08637 254 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 CELA3BP08861 270 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 BCL3P20749 454 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 C4BPBP20851 252 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 IL32P24001 234 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 RNPS1Q15287 305 aaKnown RBP9.1□□□□□ -0.95
TPM1-210ENST00000558264 ZNF660Q6AZW8 331 aaPredicted RBP9.1□□□□□ -0.95
TPM1-210ENST00000558264 THOC7Q6I9Y2 204 aaKnown RBP9.1□□□□□ -0.95
TPM1-210ENST00000558264 Q6ZPA2 131 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 COLCA1Q6ZS62 124 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 FOXRED2Q8IWF2 684 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 CCDC54Q8NEL0 328 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 ZNF442Q9H7R0 627 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 ASCL3Q9NQ33 180 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms