RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 BMXP51813 675 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 ZP1P60852 638 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 ERVK11-1P61568 191 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 GPR176Q14439 515 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 ZMYND11Q15326 602 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 SMIM21Q3B7S5 101 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 ZNF404Q494X3 552 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 AVPI1Q5T686 147 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 C22orf42Q6IC83 251 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 CRIP3Q6Q6R5 217 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 FIP1L1Q6UN15 594 aaKnown RBP8.78□□□□□ -1
LRRC28-204ENST00000558172 ASCL4Q6XD76 172 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 DCDC5Q6ZRR9 648 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 GPR141Q7Z602 305 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 LRRTM1Q86UE6 522 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 TPRA1Q86W33 373 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 LYPD6Q86Y78 171 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 JAGN1Q8N5M9 183 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 TNFAIP8L1Q8WVP5 186 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 SLAMF9Q96A28 289 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 RFT1Q96AA3 541 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 RAB39BQ96DA2 213 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 KCTD7Q96MP8 289 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 GAL3ST1Q99999 423 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 NRIP2Q9BQI9 281 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 CHCHD6Q9BRQ6 235 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 DNTTIP1Q9H147 329 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 SMURF1Q9HCE7 757 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 MTCH1Q9NZJ7 389 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 DNAJB11Q9UBS4 358 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 MIOXQ9UGB7 285 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 PCDHB10Q9UN67 800 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 ABCA1O95477 2261 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 ACANP16112 2415 aa8.78□□□□□ -1
LRRC28-204ENST00000558172 LOC100506127A0A0U1RQW1 187 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 RNF223E7ERA6 249 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 C3orf80F5H4A9 247 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-204ENST00000558172 SPRY1O43609 319 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-204ENST00000558172 AIREO43918 545 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 KDM4BO94953 1096 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 ZNF205O95201 554 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 EGR1P18146 543 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 ADRA2CP18825 462 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 MTNR1BP49286 362 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 C1orf100Q5SVJ3 147 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 FAM201AQ5SY85 155 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 ATPAF1Q5TC12 328 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-204ENST00000558172 SFRP4Q6FHJ7 346 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-204ENST00000558172 ACP7Q6ZNF0 438 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 RNF144BQ7Z419 303 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 DEFB108BQ8NET1 73 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 OR5D18Q8NGL1 313 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 TMEM246Q9BRR3 403 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 FAM192AQ9GZU8 254 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 METTL9Q9H1A3 318 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 SEBOXQ9HB31 216 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-204ENST00000558172 PATZ1Q9HBE1 687 aaKnown RBP8.77□□□□□ -1.01
LRRC28-204ENST00000558172 HES4Q9HCC6 221 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 NLKQ9UBE8 527 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 GHRLQ9UBU3 117 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 ING4Q9UNL4 249 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 V9GY05 133 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 MALRD1Q5VYJ5 2156 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 OTOGQ6ZRI0 2925 aa8.77□□□□□ -1.01
LRRC28-204ENST00000558172 A0A096LNT2 108 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 IGHV4-61A0A0C4DH41 118 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 IGKV1-12A0A0C4DH73 117 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 OR2AT4A6NND4 320 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 TNFRSF13BO14836 293 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-204ENST00000558172 WNT9BO14905 357 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 ANGPTL7O43827 346 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 KNG1P01042 644 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 IGKV1D-12P01611 117 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 CSTBP04080 98 aaKnown RBP8.76□□□□□ -1.01
LRRC28-204ENST00000558172 WNT2P09544 360 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 UBBP0CG47 229 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 FOSL1P15407 271 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 RAB3BP20337 219 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 BCL3P20749 454 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 OR3A4PP47883 348 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 NPBWR2P48146 333 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 GMFBP60983 142 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 RSU1Q15404 277 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 ELP2Q6IA86 826 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 NLRC3Q7RTR2 1065 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 SLC36A1Q7Z2H8 476 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 ANKRD13BQ86YJ7 626 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 FAM58AQ8N1B3 248 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 C19orf18Q8NEA5 215 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 Q8NFD4 153 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 OR6M1Q8NGM8 313 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 CLDND2Q8NHS1 167 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 EMG1Q92979 244 aaKnown RBP8.76□□□□□ -1.01
LRRC28-204ENST00000558172 NEIL1Q96FI4 390 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-204ENST00000558172 MED30Q96HR3 178 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 ZNF488Q96MN9 340 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 FUNDC2Q9BWH2 189 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 WDR13Q9H1Z4 485 aa8.76□□□□□ -1.01
LRRC28-204ENST00000558172 ZNF665Q9H7R5 613 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms