RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.82■□□□□ 0.44
CASC4-204ENST00000557945 NOS1APO75052 506 aaPredicted RBP17.82■□□□□ 0.44
CASC4-204ENST00000557945 PTGFRP43088 359 aa17.82■□□□□ 0.44
CASC4-204ENST00000557945 MICBQ29980 383 aa17.82■□□□□ 0.44
CASC4-204ENST00000557945 CDH26Q8IXH8 852 aa17.82■□□□□ 0.44
CASC4-204ENST00000557945 MUC20Q8N307 709 aaPredicted RBP17.82■□□□□ 0.44
CASC4-204ENST00000557945 ZSCAN4Q8NAM6 433 aaPredicted RBP17.82■□□□□ 0.44
CASC4-204ENST00000557945 KCTD7Q96MP8 289 aa17.82■□□□□ 0.44
CASC4-204ENST00000557945 S100A13Q99584 98 aa17.82■□□□□ 0.44
CASC4-204ENST00000557945 RNF167Q9H6Y7 350 aa17.82■□□□□ 0.44
CASC4-204ENST00000557945 CNTD2Q9H8S5 307 aa17.82■□□□□ 0.44
CASC4-204ENST00000557945 RASL12Q9NYN1 266 aa17.82■□□□□ 0.44
CASC4-204ENST00000557945 PCDHB10Q9UN67 800 aa17.82■□□□□ 0.44
CASC4-204ENST00000557945 ING4Q9UNL4 249 aa17.82■□□□□ 0.44
CASC4-204ENST00000557945 TRAV1-2A0A0B4J238 106 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 IGKV1-12A0A0C4DH73 117 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 H7C1Q1 480 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 PDCD5O14737 125 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 IGKV1D-12P01611 117 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 GYPAP02724 150 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 ACAA1P09110 424 aaPredicted RBP17.81■□□□□ 0.44
CASC4-204ENST00000557945 BCL3P20749 454 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 RPL5P46777 297 aaKnown RBP17.81■□□□□ 0.44
CASC4-204ENST00000557945 NPBWR2P48146 333 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 LSM3P62310 102 aaKnown RBP17.81■□□□□ 0.44
CASC4-204ENST00000557945 KCNJ8Q15842 424 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 SMIM21Q3B7S5 101 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 ZNF404Q494X3 552 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 TMEM155Q4W5P6 130 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 GDPGP1Q6ZNW5 385 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 SAXO1Q8IYX7 474 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 SPICQ8N5J4 248 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 OR5T2Q8NGG2 359 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 FOXRED1Q96CU9 486 aaPredicted RBP17.81■□□□□ 0.44
CASC4-204ENST00000557945 TMEM246Q9BRR3 403 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 CENPOQ9BU64 300 aa17.81■□□□□ 0.44
CASC4-204ENST00000557945 TEX15Q9BXT5 2789 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 SHISA3A0PJX4 238 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 F8VVB4 439 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 F8VWA3 439 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 CALCBP10092 127 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 MUC1P15941 1255 aaPredicted RBP17.8■□□□□ 0.44
CASC4-204ENST00000557945 RSU1Q15404 277 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 TEX36Q5VZQ5 186 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 ACP7Q6ZNF0 438 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 C1QL2Q7Z5L3 287 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 FAM90A1Q86YD7 464 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 Q8IYB0 196 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 MAPK1IP1LQ8NDC0 245 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 CLDND2Q8NHS1 167 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 EMG1Q92979 244 aaKnown RBP17.8■□□□□ 0.44
CASC4-204ENST00000557945 UQCC2Q9BRT2 126 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 RBFOX1Q9NWB1 397 aaKnown RBP17.8■□□□□ 0.44
CASC4-204ENST00000557945 NLKQ9UBE8 527 aa17.8■□□□□ 0.44
CASC4-204ENST00000557945 MRPS28Q9Y2Q9 187 aaKnown RBP17.8■□□□□ 0.44
CASC4-204ENST00000557945 KDM4BO94953 1096 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 CDRT1O95170 752 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 FSTL3O95633 263 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 ERVK11-1P61568 191 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 GPR107Q5VW38 600 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 PXT1Q8NFP0 134 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 OR4D6Q8NGJ1 314 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 GFI1Q99684 422 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 METTL9Q9H1A3 318 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 PLGRKTQ9HBL7 147 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 A0A096LNT2 108 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 OR2AT4A6NND4 320 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 CEACAM18A8MTB9 384 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 SMAD7O15105 426 aaKnown RBP17.79■□□□□ 0.44
CASC4-204ENST00000557945 SFTPBP07988 381 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 RAB3BP20337 219 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 MTNR1BP49286 362 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 PSMD7P51665 324 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 LOXL1Q08397 574 aaPredicted RBP17.79■□□□□ 0.44
CASC4-204ENST00000557945 AWAT2Q6E213 333 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 GLIPR1L1Q6UWM5 242 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 SPNS3Q6ZMD2 512 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 LYPD6Q86Y78 171 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 CIARTQ8N365 385 aaPredicted RBP17.79■□□□□ 0.44
CASC4-204ENST00000557945 OR10K1Q8NGX5 313 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 C12orf43Q96C57 262 aaKnown RBP17.79■□□□□ 0.44
CASC4-204ENST00000557945 HES4Q9HCC6 221 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 V9GY05 133 aa17.79■□□□□ 0.44
CASC4-204ENST00000557945 MAP1AP78559 2803 aaPredicted RBP17.78■□□□□ 0.44
CASC4-204ENST00000557945 SMIM30A4D0T7 59 aa17.78■□□□□ 0.44
CASC4-204ENST00000557945 HTR3BO95264 441 aa17.78■□□□□ 0.44
CASC4-204ENST00000557945 HEXAP06865 529 aa17.78■□□□□ 0.44
CASC4-204ENST00000557945 RPS2P15880 293 aaKnown RBP17.78■□□□□ 0.44
CASC4-204ENST00000557945 PRKACAP17612 351 aa17.78■□□□□ 0.44
CASC4-204ENST00000557945 SDC2P34741 201 aa17.78■□□□□ 0.44
CASC4-204ENST00000557945 SNU13P55769 128 aaKnown RBP17.78■□□□□ 0.44
CASC4-204ENST00000557945 OR10A3P58181 314 aa17.78■□□□□ 0.44
CASC4-204ENST00000557945 FIP1L1Q6UN15 594 aaKnown RBP17.78■□□□□ 0.44
CASC4-204ENST00000557945 DCDC5Q6ZRR9 648 aa17.78■□□□□ 0.44
CASC4-204ENST00000557945 FAM58AQ8N1B3 248 aa17.78■□□□□ 0.44
CASC4-204ENST00000557945 RAB39BQ96DA2 213 aa17.78■□□□□ 0.44
CASC4-204ENST00000557945 ZNF665Q9H7R5 613 aa17.78■□□□□ 0.44
CASC4-204ENST00000557945 OR14J1Q9UGF5 321 aa17.78■□□□□ 0.44
CASC4-204ENST00000557945 ITPR3Q14573 2671 aa17.77■□□□□ 0.43
CASC4-204ENST00000557945 RFPL4AA6NLU0 287 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms