RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 LRRC29Q8WV35 223 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 TSEN15Q8WW01 171 aaKnown RBP7.53□□□□□ -1.2
CHD8-214ENST00000557727 UFD1Q92890 307 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 MUL1Q969V5 352 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 SPSB1Q96BD6 273 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 C18orf12Q96KH6 178 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 ZNF488Q96MN9 340 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 SPACA5Q96QH8 159 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 NR1H4Q96RI1 486 aaPredicted RBP7.53□□□□□ -1.2
CHD8-214ENST00000557727 GFI1Q99684 422 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 NKX3-1Q99801 234 aaPredicted RBP7.53□□□□□ -1.2
CHD8-214ENST00000557727 SMR3AQ99954 134 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 NRIP2Q9BQI9 281 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 TMEM246Q9BRR3 403 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 TMED9Q9BVK6 235 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 PKIBQ9C010 78 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 MTCH1Q9NZJ7 389 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 CTSZQ9UBR2 303 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 ZNF222Q9UK12 451 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 RNF114Q9Y508 228 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 ANK3Q12955 4377 aaKnown RBP7.53□□□□□ -1.2
CHD8-214ENST00000557727 NAV3Q8IVL0 2385 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 A0A1B0GW55 424 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 FAM230AA0A1W2PPH8 454 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 A0A1W2PPK0 400 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 SHISA3A0PJX4 238 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 A6NLC8 198 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 CEACAM18A8MTB9 384 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 LGALS8O00214 317 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 AKR7A2O43488 359 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 TFF1P04155 84 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 ALDOBP05062 364 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 UCHL1P09936 223 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 DUX4L2P0CJ85 424 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 DUX4L3P0CJ86 424 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 DUX4L4P0CJ87 422 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 DUX4L5P0CJ88 424 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 DUX4L6P0CJ89 424 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 DUX4L7P0CJ90 424 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 IGHV4-31P0DP07 118 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 JUNBP17275 347 aaPredicted RBP7.52□□□□□ -1.21
CHD8-214ENST00000557727 GABRA5P31644 462 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 MDH2P40926 338 aaKnown RBP7.52□□□□□ -1.21
CHD8-214ENST00000557727 RBP2P50120 134 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 SEC61A1P61619 476 aaKnown RBP7.52□□□□□ -1.21
CHD8-214ENST00000557727 CNN3Q15417 329 aaKnown RBP7.52□□□□□ -1.21
CHD8-214ENST00000557727 TMEM249Q2WGJ8 235 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 ACSM3Q53FZ2 586 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 STUMQ69YW2 141 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 DUX4L9Q6RFH8 374 aaPredicted RBP7.52□□□□□ -1.21
CHD8-214ENST00000557727 LYPD2Q6UXB3 125 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 ASCL4Q6XD76 172 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 ZNF841Q6ZN19 808 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 KCTD8Q6ZWB6 473 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 C1QL2Q7Z5L3 287 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 LRRTM1Q86UE6 522 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 ZNF573Q86YE8 665 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 MS4A15Q8N5U1 240 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 POC1AQ8NBT0 407 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 TSPAN14Q8NG11 270 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 OR5D14Q8NGL3 314 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 OR11L1Q8NGX0 322 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 FCGR1BQ92637 280 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 RAB1CQ92928 201 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 TMEM203Q969S6 136 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 DACT3Q96B18 629 aaPredicted RBP7.52□□□□□ -1.21
CHD8-214ENST00000557727 C1orf147Q96MC9 270 aaPredicted RBP7.52□□□□□ -1.21
CHD8-214ENST00000557727 HIST1H2AAQ96QV6 131 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 NARFLQ9H6Q4 476 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 NOX4Q9NPH5 578 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 DUX4Q9UBX2 424 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 KIAA2026Q5HYC2 2103 aa7.52□□□□□ -1.21
CHD8-214ENST00000557727 NF1P21359 2839 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 NIPBLQ6KC79 2804 aaeCLIP7.51□□□□□ -1.21
CHD8-214ENST00000557727 IGKV1D-17A0A075B6S4 117 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 PPIAL4EA0A075B759 164 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 IGHV3OR15-7A0A075B7D8 119 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 OOEPA6NGQ2 149 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 LRRC30A6NM36 301 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 PPIAL4DF5H284 164 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 GABRPO00591 440 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 SERPINA3P01011 423 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 CD2P06729 351 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 INHBBP09529 407 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 WNT2P09544 360 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 PPIAL4FP0DN26 164 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 CD99P14209 185 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 FOSL1P15407 271 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 RAB3AP20336 220 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 PRKACBP22694 351 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 NPBWR2P48146 333 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 MTCP1P56278 107 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 PDZK1IP1Q13113 114 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 KISS1Q15726 138 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 NEDD8Q15843 81 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 SFRP4Q6FHJ7 346 aaPredicted RBP7.51□□□□□ -1.21
CHD8-214ENST00000557727 ACP7Q6ZNF0 438 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 LHFPL2Q6ZUX7 228 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 SLC25A26Q70HW3 274 aa7.51□□□□□ -1.21
CHD8-214ENST00000557727 C1orf87Q8N0U7 546 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms