RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 MYL9P24844 172 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 PTGFRP43088 359 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 TIMM50Q3ZCQ8 353 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 NR2C2APQ86WQ0 139 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 NKAIN3Q8N8D7 197 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 POC1AQ8NBT0 407 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 OR5T2Q8NGG2 359 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 OR4D6Q8NGJ1 314 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 OR10Z1Q8NGY1 313 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 RAB1CQ92928 201 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 TIMD4Q96H15 378 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 KCTD7Q96MP8 289 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 RBFOX1Q9NWB1 397 aaKnown RBP12.81□□□□□ -0.36
NEDD1-213ENST00000557644 PPIAL4AQ9Y536 164 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 ZANQ9Y493 2812 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 TRAV1-2A0A0B4J238 106 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 IGHV4-61A0A0C4DH41 118 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 MEGF11A6BM72 1044 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 TFF1P04155 84 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 SFTPBP07988 381 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 GLRA1P23415 457 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 SDC2P34741 201 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 FAM90A1Q86YD7 464 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 MAPK1IP1LQ8NDC0 245 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 CEP19Q96LK0 163 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 TMEM165Q9HC07 324 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 FLNAP21333 2647 aaKnown RBP12.8□□□□□ -0.36
NEDD1-213ENST00000557644 RNF223E7ERA6 249 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 ERVK11-1P61568 191 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 NCS1P62166 190 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 MXD1Q05195 221 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 MKXQ8IYA7 352 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 OR10K1Q8NGX5 313 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 CPNE2Q96FN4 548 aaPredicted RBP12.8□□□□□ -0.36
NEDD1-213ENST00000557644 SMURF1Q9HCE7 757 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 IL36RNQ9UBH0 155 aa12.8□□□□□ -0.36
NEDD1-213ENST00000557644 OOEPA6NGQ2 149 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 NOS1APO75052 506 aaPredicted RBP12.79□□□□□ -0.36
NEDD1-213ENST00000557644 NXPH2O95156 264 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 CLEC2LP0C7M8 214 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 CAV3P56539 151 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 VBP1P61758 197 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 GLT8D1Q68CQ7 371 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 GDPGP1Q6ZNW5 385 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 LRRC28Q86X40 367 aaPredicted RBP12.79□□□□□ -0.36
NEDD1-213ENST00000557644 ANKRD13BQ86YJ7 626 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 PNLDC1Q8NA58 520 aaKnown RBP12.79□□□□□ -0.36
NEDD1-213ENST00000557644 ELL3Q9HB65 397 aaPredicted RBP12.79□□□□□ -0.36
NEDD1-213ENST00000557644 ING4Q9UNL4 249 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 A0A096LNT2 108 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 TRAPPC2LH3BP13 241 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 LGALS8O00214 317 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 CYB5AP00167 134 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 GYPAP02724 150 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 ACP7Q6ZNF0 438 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 CIARTQ8N365 385 aaPredicted RBP12.79□□□□□ -0.36
NEDD1-213ENST00000557644 TMEM246Q9BRR3 403 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 HES4Q9HCC6 221 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 DNAJB11Q9UBS4 358 aa12.79□□□□□ -0.36
NEDD1-213ENST00000557644 MRPS28Q9Y2Q9 187 aaKnown RBP12.79□□□□□ -0.36
NEDD1-213ENST00000557644 ACAA1P09110 424 aaPredicted RBP12.78□□□□□ -0.36
NEDD1-213ENST00000557644 SLC25A16P16260 332 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 RAB3BP20337 219 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 MDH2P40926 338 aaKnown RBP12.78□□□□□ -0.36
NEDD1-213ENST00000557644 MTNR1BP49286 362 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 CTF1Q16619 201 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 MICBQ29980 383 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 ZNF404Q494X3 552 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 TEX36Q5VZQ5 186 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 GLIPR1L1Q6UWM5 242 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 CLVS1Q8IUQ0 354 aaPredicted RBP12.78□□□□□ -0.36
NEDD1-213ENST00000557644 CDH26Q8IXH8 852 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 ZSCAN4Q8NAM6 433 aaPredicted RBP12.78□□□□□ -0.36
NEDD1-213ENST00000557644 GAL3ST1Q99999 423 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 UQCC2Q9BRT2 126 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 REG4Q9BYZ8 158 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 V9GY05 133 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 SVEP1Q4LDE5 3571 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 A0A1W2PP11 408 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 KDM4BO94953 1096 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 GABARAPO95166 117 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 CD37P11049 281 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 IL2RGP31785 369 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 SNU13P55769 128 aaKnown RBP12.78□□□□□ -0.36
NEDD1-213ENST00000557644 CLDN12P56749 244 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 AWAT2Q6E213 333 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 LYPD2Q6UXB3 125 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 SAXO1Q8IYX7 474 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 PXT1Q8NFP0 134 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 CLDND2Q8NHS1 167 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 KCNK15Q9H427 330 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 PLGRKTQ9HBL7 147 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 NLKQ9UBE8 527 aa12.78□□□□□ -0.36
NEDD1-213ENST00000557644 ACANP16112 2415 aa12.77□□□□□ -0.36
NEDD1-213ENST00000557644 TRAV38-1A0A0B4J264 116 aa12.77□□□□□ -0.36
NEDD1-213ENST00000557644 A0A0G2JK05 382 aa12.77□□□□□ -0.36
NEDD1-213ENST00000557644 DUSP1P28562 367 aa12.77□□□□□ -0.36
NEDD1-213ENST00000557644 CEBPDP49716 269 aaPredicted RBP12.77□□□□□ -0.36
NEDD1-213ENST00000557644 RSU1Q15404 277 aa12.77□□□□□ -0.36
NEDD1-213ENST00000557644 SLC22A6Q4U2R8 563 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms