RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SLC29A1Q99808 456 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 CIB1Q99828 191 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 ZNF426Q9BUY5 554 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 EDEM2Q9BV94 578 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 RSPO3Q9BXY4 272 aaPredicted RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 SLC19A3Q9BZV2 496 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 COQ10BQ9H8M1 238 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 NMNAT1Q9HAN9 279 aaPredicted RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 CACYBPQ9HB71 228 aaKnown RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 FOLH1BQ9HBA9 442 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 NGBQ9NPG2 151 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 DAZ3Q9NR90 486 aaKnown RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 YAE1D1Q9NRH1 226 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 ACER3Q9NUN7 267 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 EHFQ9NZC4 300 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 MGAT4BQ9UQ53 548 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 ZNF443Q9Y2A4 671 aaPredicted RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 SLC35A3Q9Y2D2 325 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 POFUT2Q9Y2G5 429 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 SAMHD1Q9Y3Z3 626 aaKnown RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 FAM32AQ9Y421 112 aaKnown RBP2.36□□□□□ -2.03
VRK1-207ENST00000557352 ORC6Q9Y5N6 252 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 GMPPBQ9Y5P6 360 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 AP4B1Q9Y6B7 739 aa2.36□□□□□ -2.03
VRK1-207ENST00000557352 TLN1Q9Y490 2541 aaKnown RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 ESPL1Q14674 2120 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 CEP295Q9C0D2 2601 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 SPTA1P02549 2419 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 IGLV3-32A0A0A0MS00 114 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 A0A0B4J2E0 115 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 A0A1B0GX12 115 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 TRAPPC13A5PLN9 417 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 C9J4A7 227 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 H3BNH8 94 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 ZNF701M0R085 212 aaPredicted RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 M0R3G1 203 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 TNFRSF11BO00300 401 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 GNGT2O14610 69 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 CHP2O43745 196 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 TPST1O60507 370 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 EIF4E2O60573 245 aaKnown RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 FCMRO60667 390 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 ALOX12BO75342 701 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 TRIM3O75382 744 aaPredicted RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 E2F6O75461 281 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 KLF7O75840 302 aaPredicted RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 CCNB2O95067 398 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 GADD45GO95257 159 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 STATHP02808 62 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 OPN1SWP03999 348 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 TSPAN19P0C672 248 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 ICAM2P13598 275 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 CCNA2P20248 432 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 TBXA2RP21731 343 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 MMP11P24347 488 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 FKBP2P26885 142 aaKnown RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 DPP4P27487 766 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 AQP1P29972 269 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 RRM2P31350 389 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 ACAA2P42765 397 aaKnown RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 GSSP48637 474 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 TMED10P49755 219 aaKnown RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 ZNF136P52737 540 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 CTBP2P56545 445 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 RGS8P57771 180 aaPredicted RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 RPL32P62910 135 aaKnown RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 BTG2P78543 158 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 ST3GAL3Q11203 375 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 TSPAN31Q12999 210 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 APOFQ13790 326 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 EXOSC2Q13868 293 aaKnown RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 TRAM2Q15035 370 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 NCF4Q15080 339 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 PDK3Q15120 406 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 NSDHLQ15738 373 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 LRRC36Q1X8D7 754 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 ZNF311Q5JNZ3 666 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 RBM48Q5RL73 367 aaKnown RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 MRPL2Q5T653 305 aaKnown RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 METTL11BQ5VVY1 283 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 ASPHD2Q6ICH7 369 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 H3F3CQ6NXT2 135 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 NPSR1Q6W5P4 371 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 ZNF836Q6ZNA1 936 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 DGAT2L6Q6ZPD8 337 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 RASSF6Q6ZTQ3 369 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 ANKRD37Q7Z713 158 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 EGFL6Q8IUX8 553 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 C8orf59Q8N0T1 100 aaPredicted RBP2.35□□□□□ -2.03
VRK1-207ENST00000557352 CLEC4FQ8N1N0 589 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 BCORP1Q8N888 145 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 MINDY2Q8NBR6 621 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 ZNF555Q8NEP9 628 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 OR10G2Q8NGC3 310 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 OR5L2Q8NGL0 311 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 OR52P1PQ8NH57 321 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 M1APQ8TC57 530 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 SLC7A13Q8TCU3 470 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 GPR151Q8TDV0 419 aa2.35□□□□□ -2.03
VRK1-207ENST00000557352 DNAJA4Q8WW22 397 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms