RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FAM230AA0A1W2PPH8 454 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 PNLIPP16233 465 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 GUCA1AP43080 201 aaPredicted RBP9.94□□□□□ -0.82
SRP54-213ENST00000556994 ALDH3B1P43353 468 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 MTCP1P56278 107 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 SNAI3Q3KNW1 292 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 OR5L1Q8NGL2 311 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 MARS2Q96GW9 593 aaKnown RBP9.94□□□□□ -0.82
SRP54-213ENST00000556994 WDR77Q9BQA1 342 aaPredicted RBP9.94□□□□□ -0.82
SRP54-213ENST00000556994 RBM24Q9BX46 236 aaKnown RBP9.94□□□□□ -0.82
SRP54-213ENST00000556994 CHST5Q9GZS9 411 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 AK3Q9UIJ7 227 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 ZDHHC8Q9ULC8 765 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 RCL1Q9Y2P8 373 aaKnown RBP9.94□□□□□ -0.82
SRP54-213ENST00000556994 E5RGE8 158 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 ETV2O00321 342 aaPredicted RBP9.94□□□□□ -0.82
SRP54-213ENST00000556994 PIAS2O75928 621 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 SMIM6P0DI80 62 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 ZNF728P0DKX0 622 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 RAB5AP20339 215 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 TMEM187Q14656 261 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 RNF212Q495C1 297 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 ABCA11PQ4W5N1 156 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 SLC25A53Q5H9E4 307 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 NSUN5P2Q63ZY6 315 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 SLC16A14Q7RTX9 510 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 OR2M3Q8NG83 312 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 OR11L1Q8NGX0 322 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 RTN4IP1Q8WWV3 396 aaPredicted RBP9.94□□□□□ -0.82
SRP54-213ENST00000556994 GNRHR2Q96P88 292 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 ZNF385AQ96PM9 386 aaKnown RBP9.94□□□□□ -0.82
SRP54-213ENST00000556994 PLEKHA2Q9HB19 425 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 C19orf12Q9NSK7 152 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 MYOTQ9UBF9 498 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 KCNIP3Q9Y2W7 256 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 NSG2Q9Y328 171 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 V9GYS6 101 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 FRYLO94915 3013 aa9.94□□□□□ -0.82
SRP54-213ENST00000556994 IGLV3-1P01715 115 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 S100A8P05109 93 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 MSR1P21757 451 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 ITGA3P26006 1051 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 PAX6P26367 422 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 PPP1CCP36873 323 aaKnown RBP9.93□□□□□ -0.82
SRP54-213ENST00000556994 GLP1RP43220 463 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 SULT1A1P50225 295 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 ENDOGQ14249 297 aaKnown RBP9.93□□□□□ -0.82
SRP54-213ENST00000556994 KCNMB1Q16558 191 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 NKAIN1Q4KMZ8 207 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 FAM209BQ5JX69 171 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 TMEM182Q6ZP80 229 aaPredicted RBP9.93□□□□□ -0.82
SRP54-213ENST00000556994 SYT13Q7L8C5 426 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 WDSUB1Q8N9V3 476 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 TCEAL3Q969E4 200 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 ZNF837Q96EG3 531 aaPredicted RBP9.93□□□□□ -0.82
SRP54-213ENST00000556994 Q96M66 194 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 RARRES2Q99969 163 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 ZNF251Q9BRH9 671 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 PLEK2Q9NYT0 353 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 LUZP4Q9P127 313 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 TRBV23-1A0A0A0MS06 115 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 CCDC85CA6NKD9 419 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 AQP7P3A6NL99 342 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 M0R135 149 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 GPR37O15354 613 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 OR8U8P0C7N1 319 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 MSX1P28360 303 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 CSNK1A1P48729 337 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 NXPH1P58417 271 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 SLC35A1P78382 337 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 HMGN3Q15651 99 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 NCMAPQ5T1S8 102 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 RHBDD2Q6NTF9 364 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 BATF2Q8N1L9 274 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 SLC25A45Q8N413 288 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 GJC3Q8NFK1 279 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 FAM213BQ8TBF2 198 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 ZNF799Q96GE5 643 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 NAA60Q9H7X0 242 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 LMAN1LQ9HAT1 526 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 SEBOXQ9HB31 216 aaPredicted RBP9.93□□□□□ -0.82
SRP54-213ENST00000556994 ZMAT5Q9UDW3 170 aaKnown RBP9.93□□□□□ -0.82
SRP54-213ENST00000556994 MIOXQ9UGB7 285 aa9.93□□□□□ -0.82
SRP54-213ENST00000556994 PUS1Q9Y606 427 aaKnown RBP eCLIP9.93□□□□□ -0.82
SRP54-213ENST00000556994 IGKV1-27A0A075B6S5 117 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 CCDC187A0A096LP49 1063 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 BORCS7-ASMTA0A0B4J1R7 106 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 RRP8O43159 456 aaKnown RBP9.92□□□□□ -0.82
SRP54-213ENST00000556994 TLX3O43711 291 aaPredicted RBP9.92□□□□□ -0.82
SRP54-213ENST00000556994 CLN5O75503 358 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 SEC11BP0C7V7 166 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 P2RY1P47900 373 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 RSU1Q15404 277 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 IGSF11Q5DX21 431 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 FBXW12Q6X9E4 464 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 ADPRHL1Q8NDY3 354 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 AKR7LQ8NHP1 331 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 SLC22A8Q8TCC7 542 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 PP6455Q8WZ26 134 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 SGK3Q96BR1 496 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms