RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 HCKP08631 526 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 MMP7P09237 267 aaPredicted RBP3.84□□□□□ -1.79
SRP54-212ENST00000556992 AKAIN1P0CW23 69 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 OR3A2P47893 321 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 HTR5AP47898 357 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 FUT6P51993 359 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 EFNB2P52799 333 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 MTCP1P56278 107 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 ACTBP60709 375 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 RAB1AP62820 205 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 ACTG1P63261 375 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 QRFPP83859 136 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 PMPCAQ10713 525 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 FAPQ12884 760 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 PPA1Q15181 289 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 CNN3Q15417 329 aaKnown RBP3.84□□□□□ -1.79
SRP54-212ENST00000556992 KISS1Q15726 138 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 CARTPTQ16568 116 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 TATDN3Q17R31 274 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 GFOD2Q3B7J2 385 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 PABPC1L2AQ5JQF8 200 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 CLVS2Q5SYC1 327 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 SFRP4Q6FHJ7 346 aaPredicted RBP3.84□□□□□ -1.79
SRP54-212ENST00000556992 RTL6Q6ICC9 239 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 MTFR2Q6P444 385 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 GLIPR1L1Q6UWM5 242 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 COLCA1Q6ZS62 124 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 P4HA3Q7Z4N8 544 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 ZNF101Q8IZC7 436 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 OR5AS1Q8N127 324 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 TMEM229BQ8NBD8 167 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 CHST4Q8NCG5 386 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 STEAP2Q8NFT2 490 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 OR56B1Q8NGI3 324 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 OR4D6Q8NGJ1 314 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 OR51A2Q8NGJ7 313 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 OR5L1Q8NGL2 311 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 OR10R2Q8NGX6 335 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 AKR7LQ8NHP1 331 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 GPX8Q8TED1 209 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 BCL2L2Q92843 193 aaPredicted RBP3.84□□□□□ -1.79
SRP54-212ENST00000556992 SEH1LQ96EE3 360 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 REEP6Q96HR9 211 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 LYZL4Q96KX0 146 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 HIST1H2AAQ96QV6 131 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 DMRTA2Q96SC8 542 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 GPER1Q99527 375 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 URM1Q9BTM9 101 aaKnown RBP3.84□□□□□ -1.79
SRP54-212ENST00000556992 C1QTNF5Q9BXJ0 243 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 CHST5Q9GZS9 411 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 MED28Q9H204 178 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 NOX3Q9HBY0 568 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 MCUBQ9NWR8 336 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 KLK11Q9UBX7 282 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 ZNF221Q9UK13 617 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 ING4Q9UNL4 249 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 SLC7A11Q9UPY5 501 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 DNHD1Q96M86 4753 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 SEC16AO15027 2179 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 UNC13CQ8NB66 2214 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 SPTA1P02549 2419 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 IGKV1-9A0A0C4DH69 117 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 C7orf66A4D0T2 115 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 SNRPGP15A8MWD9 76 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 TMEM14DPA8MWL7 114 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 ZNF736B4DX44 427 aaPredicted RBP3.83□□□□□ -1.8
SRP54-212ENST00000556992 BOLA2-SMG1P6H3BVE0 249 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 RAB27BO00194 218 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 F2RL2O00254 374 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 GMDSO60547 372 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 SS18L1O75177 396 aaPredicted RBP3.83□□□□□ -1.8
SRP54-212ENST00000556992 PEX14O75381 377 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 CA11O75493 328 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 CRTAPO75718 401 aaPredicted RBP3.83□□□□□ -1.8
SRP54-212ENST00000556992 NDUFB6O95139 128 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 TGM6O95932 706 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 CYB5AP00167 134 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 NRASP01111 189 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 IGHV3-9P01782 118 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 HLA-HP01893 362 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 IL5P05113 134 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 HOXD4P09016 255 aaPredicted RBP3.83□□□□□ -1.8
SRP54-212ENST00000556992 PATE4P0C8F1 98 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 TMIGD3P0DMS9 266 aaPredicted RBP3.83□□□□□ -1.8
SRP54-212ENST00000556992 TMEM225BP0DP42 221 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 CD79AP11912 226 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 GTF2F2P13984 249 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 TBPP20226 339 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 TUBG1P23258 451 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 STOMP27105 288 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 PTGER4P35408 488 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 CBX5P45973 191 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 RBP2P50120 134 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 ATP1B3P54709 279 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 TAS2R19P59542 299 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 RRAS2P62070 204 aaPredicted RBP3.83□□□□□ -1.8
SRP54-212ENST00000556992 PLA2G7Q13093 441 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 MEF2DQ14814 521 aa3.83□□□□□ -1.8
SRP54-212ENST00000556992 DAZAP2Q15038 168 aaPredicted RBP3.83□□□□□ -1.8
SRP54-212ENST00000556992 UBE2V2Q15819 145 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms