RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ZNF714Q96N38 554 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 CHCHD6Q9BRQ6 235 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 TMEM133Q9H2Q1 129 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 ABCB9Q9NP78 766 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 KRCC1Q9NPI7 259 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-245ENST00000556958 PCDHB16Q9NRJ7 776 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 VSX1Q9NZR4 365 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-245ENST00000556958 PSMC3IPQ9P2W1 217 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-245ENST00000556958 ZNF222Q9UK12 451 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 WSB1Q9Y6I7 421 aa4.39□□□□□ -1.71
ATXN3-245ENST00000556958 FAM90A18PA6NE21 464 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 ARRDC5A6NEK1 342 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 FAM90A16PA6NEW6 464 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 FAM90A20PA6NIJ5 464 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 RFPL4AA6NLU0 287 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 FAM90A9PA6NNJ1 464 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 FAM90A12PA8MX19 464 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 FAM90A5PA8MXJ8 464 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 RFPL4AL1F8VTS6 287 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 H7C1C5 153 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 CLIC1O00299 241 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 COPEO14579 308 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 XRCC2O43543 280 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 SPAG7O75391 227 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 MTRF1O75570 445 aaKnown RBP4.38□□□□□ -1.71
ATXN3-245ENST00000556958 TPPPO94811 219 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 LYPD3O95274 346 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 IFNA4P05014 189 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 FAM90A15PP0C7V4 464 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 FAM90A13PP0C7W8 464 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 FAM90A14PP0C7W9 464 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 FAM90A24PP0C7X0 464 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 PIPP12273 146 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-245ENST00000556958 TMEM11P17152 192 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 LBPP18428 481 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 CFL1P23528 166 aaKnown RBP4.38□□□□□ -1.71
ATXN3-245ENST00000556958 PSMB8P28062 276 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 ZP1P60852 638 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 LCN6P62502 163 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 MEF2CQ06413 473 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-245ENST00000556958 TNFRSF9Q07011 255 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 HES1Q14469 280 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 RFX4Q33E94 735 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 SLC36A3Q495N2 470 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 SPATS1Q496A3 300 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 FAM76BQ5HYJ3 339 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 TOR2AQ5JU69 321 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 GLYATL3Q5SZD4 288 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 LRIF1Q5T3J3 769 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 CORO6Q6QEF8 472 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 DRAM2Q6UX65 266 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 ZBTB46Q86UZ6 589 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 C4orf33Q8N1A6 199 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 ZNF491Q8N8L2 437 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 CSNK2A3Q8NEV1 391 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 OR5AN1Q8NGI8 311 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 OR6T1Q8NGN1 323 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 OR2AE1Q8NHA4 323 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 PFN4Q8NHR9 129 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 TMEM239Q8WW34 195 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 RPL3LQ92901 407 aaKnown RBP4.38□□□□□ -1.71
ATXN3-245ENST00000556958 TMEM106AQ96A25 262 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 FLYWCH2Q96CP2 140 aaKnown RBP4.38□□□□□ -1.71
ATXN3-245ENST00000556958 HIST1H2AAQ96QV6 131 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 OR5B12Q96R08 314 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 NRIP2Q9BQI9 281 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 PAPOLGQ9BWT3 736 aaKnown RBP4.38□□□□□ -1.71
ATXN3-245ENST00000556958 NDEL1Q9GZM8 345 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 SP140LQ9H930 580 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 PLEKHA1Q9HB21 404 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 MRPS28Q9Y2Q9 187 aaKnown RBP4.38□□□□□ -1.71
ATXN3-245ENST00000556958 MED31Q9Y3C7 131 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 MPC1Q9Y5U8 109 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 LHFPL6Q9Y693 200 aa4.38□□□□□ -1.71
ATXN3-245ENST00000556958 A0A0J9YWU9 116 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 hADV38S2A0JD32 116 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 LINC01548A6NM66 108 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 C16orf90A8MZG2 172 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 TOR1AO14656 332 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 TK1P04183 234 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 ABHD2P08910 425 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 KRT4P19013 534 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 GCAP28676 217 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 CRABP1P29762 137 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 SLC9A3P48764 834 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 PRRX1P54821 245 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 NME5P56597 212 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 EDDM3BP56851 147 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 UFM1P61960 85 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 GNB1P62873 340 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 ZNF45Q02386 682 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 SMIM21Q3B7S5 101 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 SNAI3Q3KNW1 292 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 KRT71Q3SY84 523 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 SOHLH1Q5JUK2 328 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 C6orf10Q5SRN2 563 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 GCNT6Q5T4J0 391 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 TPTE2P1Q5T6R2 138 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 OTPQ5XKR4 325 aa4.37□□□□□ -1.71
ATXN3-245ENST00000556958 LCN12Q6JVE5 192 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms