RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 METTL15A6NJ78 407 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 OR5B21A6NL26 309 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 AKR7A2O43488 359 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 TGM4P49221 684 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 GP2P55259 537 aaKnown RBP8.53□□□□□ -1.04
SHMT2-224ENST00000556737 OR12D2P58182 307 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 GNG3P63215 75 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 ACTG1P63261 375 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 MICBQ29980 383 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 C11orf91Q3C1V1 193 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 SYT6Q5T7P8 510 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-224ENST00000556737 ATPAF1Q5TC12 328 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-224ENST00000556737 GPR107Q5VW38 600 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 CD276Q5ZPR3 534 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 PLCXD3Q63HM9 321 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 RUSC1-AS1Q66K80 236 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 BRD3OSQ6XYD6 125 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 BTN2A1Q7KYR7 527 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 LY6G5BQ8NDX9 201 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 OR14K1Q8NGZ2 314 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 ST8SIA4Q92187 359 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 WDFY2Q96P53 400 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 DNTTIP1Q9H147 329 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 ACOXLQ9NUZ1 547 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 RPUSD1Q9UJJ7 312 aaKnown RBP8.53□□□□□ -1.04
SHMT2-224ENST00000556737 ZNF222Q9UK12 451 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 OR52A1Q9UKL2 312 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 SLC22A13Q9Y226 551 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 PIGLQ9Y2B2 252 aa8.53□□□□□ -1.04
SHMT2-224ENST00000556737 LSM2Q9Y333 95 aaKnown RBP8.53□□□□□ -1.04
SHMT2-224ENST00000556737 CMYA5Q8N3K9 4069 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 IGKV1D-17A0A075B6S4 117 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 DHRS7CA6NNS2 312 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 ZNF732B4DXR9 585 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 P2RY10O00398 339 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 CD36P16671 472 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 PRTN3P24158 256 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 TAS2R43P59537 309 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 GMFBP60983 142 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 RIPPLY1Q0D2K3 151 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 MLLT11Q13015 90 aaPredicted RBP8.52□□□□□ -1.05
SHMT2-224ENST00000556737 DGUOKQ16854 277 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 CDONQ4KMG0 1287 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 LIPKQ5VXJ0 399 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 ZNF788Q6ZQV5 615 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 CATSPERDQ86XM0 798 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 SYS1Q8N2H4 156 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 OR5T2Q8NGG2 359 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 OR5A2Q8NGI9 324 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 ANGPTL6Q8NI99 470 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 AQP3Q92482 292 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 OPALINQ96PE5 141 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 DUX5Q96PT3 197 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 PCGF1Q9BSM1 259 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 MS4A7Q9GZW8 240 aaPredicted RBP8.52□□□□□ -1.05
SHMT2-224ENST00000556737 PRDM13Q9H4Q3 707 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 ZMAT3Q9HA38 289 aaKnown RBP8.52□□□□□ -1.05
SHMT2-224ENST00000556737 EXOSC4Q9NPD3 245 aaKnown RBP8.52□□□□□ -1.05
SHMT2-224ENST00000556737 SNTG1Q9NSN8 517 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 BABAM2Q9NXR7 383 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 NDUFA13Q9P0J0 144 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 NLKQ9UBE8 527 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 ENPP5Q9UJA9 477 aa8.52□□□□□ -1.05
SHMT2-224ENST00000556737 CENPVL3A0A0U1RRI6 287 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 SMIM31A0A1B0GVY4 71 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 PQLC2LA1A4F0 135 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 NKX6-3A6NJ46 265 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 CLDN34H7C241 214 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 CCRL2O00421 344 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 SIGLEC5O15389 551 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 MTRF1O75570 445 aaKnown RBP8.51□□□□□ -1.05
SHMT2-224ENST00000556737 TOX4O94842 621 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 ECDO95905 644 aaPredicted RBP8.51□□□□□ -1.05
SHMT2-224ENST00000556737 LIPFP07098 398 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 RNASE1P07998 156 aaKnown RBP8.51□□□□□ -1.05
SHMT2-224ENST00000556737 CELP19835 753 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 KIR3DL2P43630 455 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 GTF2A1P52655 376 aaPredicted RBP8.51□□□□□ -1.05
SHMT2-224ENST00000556737 BAMBIQ13145 260 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 IKZF1Q13422 519 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 SLC9A3R2Q15599 337 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 DEFB112Q30KQ8 113 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 CLVS2Q5SYC1 327 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 GPR157Q5UAW9 335 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 HAGHLQ6PII5 290 aaPredicted RBP8.51□□□□□ -1.05
SHMT2-224ENST00000556737 C12orf54Q6X4T0 127 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 MOB3CQ70IA8 216 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 SLC36A1Q7Z2H8 476 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 KCTD20Q7Z5Y7 419 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 PRSS35Q8N3Z0 413 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 KIR3DL3Q8N743 410 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 PNLDC1Q8NA58 520 aaKnown RBP8.51□□□□□ -1.05
SHMT2-224ENST00000556737 POC1AQ8NBT0 407 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 OR13F1Q8NGS4 319 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 C8orf46Q8TAG6 207 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 HIST1H2AAQ96QV6 131 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 DCTN5Q9BTE1 182 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 TMED9Q9BVK6 235 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 GPR173Q9NS66 373 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 DNAJB11Q9UBS4 358 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms