RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 FARSAQ9Y285 508 aaKnown RBP2.22□□□□□ -2.05
SCFD1-221ENST00000556534 DYSFO75923 2080 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 SCN1AP35498 2009 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 IGHV6-1A0A0B4J1U7 121 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 OR5H1A6NKK0 313 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 MKRN2OSH3BPM6 223 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 M0QXV9 152 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 M0R1X1 148 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 CDIPTO14735 213 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 NDUFS5O43920 106 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 IGLV3-25P01717 112 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 IGHV3-11P01762 117 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 TEAD1P28347 426 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 PCK1P35558 622 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 PPIDQ08752 370 aaKnown RBP2.21□□□□□ -2.06
SCFD1-221ENST00000556534 STX4Q12846 297 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 TOMM34Q15785 309 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-221ENST00000556534 CEACAM16Q2WEN9 425 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 SYT6Q5T7P8 510 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-221ENST00000556534 HHATQ5VTY9 493 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 UNQ9165/PRO28630Q6UXU0 137 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 SSX6Q7RTT6 188 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 MDP1Q86V88 176 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 LINC00337Q8N6G1 96 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 LINC00304Q8N9R0 145 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 OR2AE1Q8NHA4 323 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 NT5CQ8TCD5 201 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 RTN4IP1Q8WWV3 396 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-221ENST00000556534 ZFP3Q96NJ6 502 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 ALS2CR12Q96Q35 445 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 VAT1Q99536 393 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 ZNF717Q9BY31 904 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-221ENST00000556534 SLC38A1Q9H2H9 487 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 CHMP4BQ9H444 224 aaKnown RBP2.21□□□□□ -2.06
SCFD1-221ENST00000556534 C12orf4Q9NQ89 552 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 IFT46Q9NQC8 304 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 EURLQ9NYK6 297 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 ANXA10Q9UJ72 324 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 ORC6Q9Y5N6 252 aa2.21□□□□□ -2.06
SCFD1-221ENST00000556534 IGHV7-4-1A0A0J9YVY3 117 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 KIR2DS1A0A191URI9 304 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 SMLR1H3BR10 107 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 MYL12BO14950 172 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 SYT1P21579 422 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 IL3RAP26951 378 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 HTR2BP41595 481 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 OR10A3P58181 314 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 TSPAN5P62079 268 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 PIGHQ14442 188 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-221ENST00000556534 SLC25A35Q3KQZ1 300 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 CDNFQ49AH0 187 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 MFSD14CQ5VZR4 134 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 Q6ZSR6 202 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 CYP4Z1Q86W10 505 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 CD302Q8IX05 232 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 OR1S1Q8NH92 325 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 OR1L1Q8NH94 360 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 DOK4Q8TEW6 326 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 CCDC12Q8WUD4 166 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-221ENST00000556534 CATSPER2Q96P56 530 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 TMED9Q9BVK6 235 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 SHCBP1LQ9BZQ2 653 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 CA10Q9NS85 328 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 ZNHIT6Q9NWK9 470 aaKnown RBP2.2□□□□□ -2.06
SCFD1-221ENST00000556534 STX18Q9P2W9 335 aaKnown RBP2.2□□□□□ -2.06
SCFD1-221ENST00000556534 RAB23Q9ULC3 237 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 NOSIPQ9Y314 301 aaKnown RBP2.2□□□□□ -2.06
SCFD1-221ENST00000556534 FADS3Q9Y5Q0 445 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 URGCP-MRPS24S4R325 110 aa2.2□□□□□ -2.06
SCFD1-221ENST00000556534 KIAA1671Q9BY89 1806 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 CHST10O43529 356 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 CBR3O75828 277 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 ZNF688P0C7X2 276 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 GIMD1P0DJR0 217 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 PSMB6P28072 239 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 AQP5P55064 265 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 DSTNP60981 165 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 OR4D1Q15615 310 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 BSXQ3C1V8 233 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 FBXL19-AS1Q494R0 122 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 THOC7Q6I9Y2 204 aaKnown RBP2.19□□□□□ -2.06
SCFD1-221ENST00000556534 BOD1L2Q8IYS8 172 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 TMEM256Q8N2U0 113 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 SPICQ8N5J4 248 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 MIR7-3HGQ8N6C7 128 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 TTLQ8NG68 377 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 OR2M7Q8NG81 312 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 OR7G1Q8NGA0 311 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 OR4K2Q8NGD2 314 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 ENKURQ8TC29 256 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 SLC25A46Q96AG3 418 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 RILPQ96NA2 401 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 SPACA5Q96QH8 159 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 METTL26Q96S19 204 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 ZNF649Q9BS31 505 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 MED10Q9BTT4 135 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 RSG1Q9BU20 258 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 NUDT9Q9BW91 350 aa2.19□□□□□ -2.06
SCFD1-221ENST00000556534 FBXO6Q9NRD1 293 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms