RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 LRRC30A6NM36 301 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 C21orf140B9A014 251 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 H3BTX0 84 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 J3QLW9 94 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 GABRPO00591 440 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 PDCD5O14737 125 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 WNT9BO14905 357 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 PRKNO60260 465 aaPredicted RBP4.38□□□□□ -1.71
SRP54-211ENST00000556445 SLC19A2O60779 497 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 RBBP9O75884 186 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 SULT1C4O75897 302 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 STK17BO94768 372 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 CDRT1O95170 752 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 HPP00738 406 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 CCL4P13236 92 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 ZNF19P17023 458 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 STOMP27105 288 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 PSMB6P28072 239 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 TNFSF8P32971 234 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 AQP2P41181 271 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 CDKN2AP42771 156 aaKnown RBP4.38□□□□□ -1.71
SRP54-211ENST00000556445 OR3A3P47888 321 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 TGM4P49221 684 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 EFNA3P52797 238 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 RPL27P61353 136 aaKnown RBP4.38□□□□□ -1.71
SRP54-211ENST00000556445 RPS25P62851 125 aaKnown RBP4.38□□□□□ -1.71
SRP54-211ENST00000556445 PPP3R1P63098 170 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 ERVK-25P63136 954 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 RPL18Q07020 188 aaKnown RBP4.38□□□□□ -1.71
SRP54-211ENST00000556445 PUDPQ08623 228 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 PSG3Q16557 428 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 TRIM16LQ309B1 348 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 ZNF791Q3KP31 576 aaPredicted RBP4.38□□□□□ -1.71
SRP54-211ENST00000556445 GLYR1Q49A26 553 aaPredicted RBP4.38□□□□□ -1.71
SRP54-211ENST00000556445 SAPCD1Q5SSQ6 148 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 SLC22A10Q63ZE4 541 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 C22orf42Q6IC83 251 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 RTL6Q6ICC9 239 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 H3F3CQ6NXT2 135 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 C3orf33Q6P1S2 294 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 KCTD18Q6PI47 426 aaPredicted RBP4.38□□□□□ -1.71
SRP54-211ENST00000556445 PAQR6Q6TCH4 344 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 UQCC3Q6UW78 93 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 ASCL4Q6XD76 172 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 Q75L30 129 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 RPS19BP1Q86WX3 136 aaKnown RBP4.38□□□□□ -1.71
SRP54-211ENST00000556445 MARCH9Q86YJ5 346 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 RAB43Q86YS6 212 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 NAXDQ8IW45 347 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 PRSS35Q8N3Z0 413 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 C17orf78Q8N4C9 275 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 TEX45Q8NA69 505 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 CYB561A3Q8NBI2 242 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 SDR9C7Q8NEX9 313 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 OR4K17Q8NGC6 315 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 OR9G4Q8NGQ1 327 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 OR13C3Q8NGS6 347 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 OR6K6Q8NGW6 343 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 FGFBP3Q8TAT2 258 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 NEIL3Q8TAT5 605 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 RNF128Q8TEB7 428 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 CCDC107Q8WV48 283 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 ASB17Q8WXJ9 295 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 TM9SF4Q92544 642 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 NXPE2Q96DL1 559 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 IMMP1LQ96LU5 166 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 Q96M85 177 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 NMNAT3Q96T66 252 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 SLC30A2Q9BRI3 323 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 ZNF649Q9BS31 505 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 HIPK2Q9H2X6 1198 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 SP140LQ9H930 580 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 ADGRL4Q9HBW9 690 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 ACKR4Q9NPB9 350 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 TMEM9BQ9NQ34 198 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 POLE4Q9NR33 117 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 GNG12Q9UBI6 72 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 FARSAQ9Y285 508 aaKnown RBP4.38□□□□□ -1.71
SRP54-211ENST00000556445 TRAPPC4Q9Y296 219 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 KLHDC2Q9Y2U9 406 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 HDGFL3Q9Y3E1 203 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 ETV7Q9Y603 341 aa4.38□□□□□ -1.71
SRP54-211ENST00000556445 PUS1Q9Y606 427 aaKnown RBP eCLIP4.38□□□□□ -1.71
SRP54-211ENST00000556445 TRAV1-2A0A0B4J238 106 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 A0A1W2PQL4 384 aaPredicted RBP4.37□□□□□ -1.71
SRP54-211ENST00000556445 RAB19A4D1S5 217 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 PRSS37A4D1T9 235 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 FBLL1A6NHQ2 334 aaKnown RBP4.37□□□□□ -1.71
SRP54-211ENST00000556445 TMEM210A6NLX4 147 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 GJE1A6NN92 205 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 LRRN3E7EW58 273 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 NPIPA5E9PKD4 350 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 J3QRK9 145 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 CCL24O00175 119 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 PLPP3O14495 311 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 ITGB1BP1O14713 200 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 RGS5O15539 181 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 GPR137BO60478 399 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 EIF1BO60739 113 aaKnown RBP4.37□□□□□ -1.71
SRP54-211ENST00000556445 KLF7O75840 302 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms