RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 ZFPL1O95159 310 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 SFTPBP07988 381 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 GNAO1P09471 354 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 PRKACBP22694 351 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 GABRA2P47869 451 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 RBP2P50120 134 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 BPIFB3P59826 476 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 ERVK11-1P61568 191 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 GPR157Q5UAW9 335 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 RBMS3Q6XE24 437 aaKnown RBP9.52□□□□□ -0.89
SLIRP-206ENST00000556375 ANGPTL5Q86XS5 388 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 C8orf59Q8N0T1 100 aaPredicted RBP9.52□□□□□ -0.89
SLIRP-206ENST00000556375 KIR3DL3Q8N743 410 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 TMEM185AQ8NFB2 350 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 SPSB1Q96BD6 273 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 FGGYQ96C11 551 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 CEP19Q96LK0 163 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 TBX15Q96SF7 602 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 COMMD4Q9H0A8 199 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 NKX1-2Q9UD57 310 aaPredicted RBP9.52□□□□□ -0.89
SLIRP-206ENST00000556375 DIMT1Q9UNQ2 313 aaKnown RBP9.52□□□□□ -0.89
SLIRP-206ENST00000556375 CAB39Q9Y376 341 aaPredicted RBP9.52□□□□□ -0.89
SLIRP-206ENST00000556375 EXOSC1Q9Y3B2 195 aaKnown RBP9.52□□□□□ -0.89
SLIRP-206ENST00000556375 MAB21L2Q9Y586 359 aa9.52□□□□□ -0.89
SLIRP-206ENST00000556375 TRBV23-1A0A0A0MS06 115 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 IGKV1-9A0A0C4DH69 117 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 ERICH4A6NGS2 130 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 RFPL4AA6NLU0 287 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 RFPL4AL1F8VTS6 287 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 TRIM77I1YAP6 450 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 SLC1A7O00341 560 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 KNG1P01042 644 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 MT-ND2P03891 347 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 PIPP12273 146 aaPredicted RBP9.51□□□□□ -0.89
SLIRP-206ENST00000556375 ATF1P18846 271 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 MYL12AP19105 171 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 AZGP1P25311 298 aaKnown RBP9.51□□□□□ -0.89
SLIRP-206ENST00000556375 ETV1P50549 477 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 ATP1B3P54709 279 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 ARF6P62330 175 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 SLC34A1Q06495 639 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 MED21Q13503 144 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 PDCD1Q15116 288 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 TMPRSS11AQ6ZMR5 421 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 LHFPL2Q6ZUX7 228 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 BCL6BQ8N143 479 aaPredicted RBP9.51□□□□□ -0.89
SLIRP-206ENST00000556375 ZNF561Q8N587 486 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 SIGLECL1Q8N7X8 197 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.51□□□□□ -0.89
SLIRP-206ENST00000556375 ZDHHC22Q8N966 263 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 ZNRF1Q8ND25 227 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 OR5AK2Q8NH90 309 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 RPS4Y2Q8TD47 263 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 FBLIM1Q8WUP2 373 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 H1FXQ92522 213 aaKnown RBP9.51□□□□□ -0.89
SLIRP-206ENST00000556375 ZNF48Q96MX3 618 aaPredicted RBP9.51□□□□□ -0.89
SLIRP-206ENST00000556375 OPALINQ96PE5 141 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 PDCD1LG2Q9BQ51 273 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 CNTD2Q9H8S5 307 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 ESM1Q9NQ30 184 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 ONECUT1Q9UBC0 465 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 DSCAML1Q8TD84 2053 aa9.51□□□□□ -0.89
SLIRP-206ENST00000556375 TENM1Q9UKZ4 2725 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 TRBV2A0A0J9YWF9 115 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 EFCAB10A6NFE3 127 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 OCM2P0CE71 109 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 OCMP0CE72 109 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-206ENST00000556375 NDUFB7P17568 137 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 PRDX2P32119 198 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 POU3F4P49335 361 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 CDK5R1Q15078 307 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 CCDC58Q4VC31 144 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 OR2G6Q5TZ20 316 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 RPL22L1Q6P5R6 122 aaKnown RBP9.5□□□□□ -0.89
SLIRP-206ENST00000556375 BRD3OSQ6XYD6 125 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 SLC25A26Q70HW3 274 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 Q8IYB0 196 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 CMTM4Q8IZR5 234 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 BATF2Q8N1L9 274 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 PARP16Q8N5Y8 322 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 CD177Q8N6Q3 437 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 OR13C9Q8NGT0 318 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 OR52N1Q8NH53 320 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 TSEN15Q8WW01 171 aaKnown RBP9.5□□□□□ -0.89
SLIRP-206ENST00000556375 TFAP2CQ92754 450 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 SLAMF9Q96A28 289 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 TMEM80Q96HE8 168 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 ZCCHC4Q9H5U6 513 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 ZMAT3Q9HA38 289 aaKnown RBP9.5□□□□□ -0.89
SLIRP-206ENST00000556375 ELL3Q9HB65 397 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-206ENST00000556375 NEK6Q9HC98 313 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 MTCH1Q9NZJ7 389 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 CNOT2Q9NZN8 540 aaKnown RBP9.5□□□□□ -0.89
SLIRP-206ENST00000556375 DHDHQ9UQ10 334 aa9.5□□□□□ -0.89
SLIRP-206ENST00000556375 CENPVL3A0A0U1RRI6 287 aa9.49□□□□□ -0.89
SLIRP-206ENST00000556375 A0A1W2PQ09 198 aa9.49□□□□□ -0.89
SLIRP-206ENST00000556375 DNAJC9-AS1A6NH13 148 aa9.49□□□□□ -0.89
SLIRP-206ENST00000556375 H0YJX3 145 aa9.49□□□□□ -0.89
SLIRP-206ENST00000556375 M0R1W7 72 aa9.49□□□□□ -0.89
SLIRP-206ENST00000556375 CYB5AP00167 134 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms