RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 FAM131AQ6UXB0 335 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 CLEC18BQ6UXF7 455 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 CLEC19AQ6UXS0 136 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 FA2HQ7L5A8 372 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 CALHM3Q86XJ0 350 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 PDPNQ86YL7 162 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 FAM58AQ8N1B3 248 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 CA13Q8N1Q1 262 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 GAPTQ8N292 157 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 OR4K2Q8NGD2 314 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 NDNFQ8TB73 568 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 CIDECQ96AQ7 238 aaPredicted RBP1.36□□□□□ -2.19
SCFD1-218ENST00000556256 RNF170Q96K19 258 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 DERL3Q96Q80 235 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 PEBP4Q96S96 227 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 TMED9Q9BVK6 235 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 SHCBP1LQ9BZQ2 653 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 TM6SF2Q9BZW4 377 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 COA1Q9GZY4 146 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 STMN3Q9NZ72 180 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 PRO0628Q9UI54 55 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 KLF13Q9Y2Y9 288 aaPredicted RBP1.36□□□□□ -2.19
SCFD1-218ENST00000556256 ORC6Q9Y5N6 252 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 V9GYY9 64 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 TRAV8-7A0A075B6U6 113 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 OR6C70A6NIJ9 312 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 SEC14L6B5MCN3 397 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 K7EN84 100 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 RFXANKO14593 260 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 PRMT5O14744 637 aaPredicted RBP1.35□□□□□ -2.19
SCFD1-218ENST00000556256 CSTAP01040 98 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 SNRPAP09012 282 aaKnown RBP1.35□□□□□ -2.19
SCFD1-218ENST00000556256 SEC11BP0C7V7 166 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 P0C880 135 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 CD9P21926 228 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 PSMB2P49721 201 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 WDR43Q15061 677 aaKnown RBP eCLIP1.35□□□□□ -2.19
SCFD1-218ENST00000556256 PMVKQ15126 192 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 STK38Q15208 465 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 CEACAM16Q2WEN9 425 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 CLLU1OSQ5K130 101 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 TRMT10CQ7L0Y3 403 aaKnown RBP1.35□□□□□ -2.19
SCFD1-218ENST00000556256 PID1Q7Z2X4 250 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 FAM19A1Q7Z5A9 133 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 SGPP2Q8IWX5 399 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 SYS1Q8N2H4 156 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 YIPF6Q96EC8 236 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 RILPQ96NA2 401 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 NAP1L5Q96NT1 182 aaPredicted RBP1.35□□□□□ -2.19
SCFD1-218ENST00000556256 SHANK2-AS3Q9BTD1 123 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 API5Q9BZZ5 524 aaKnown RBP1.35□□□□□ -2.19
SCFD1-218ENST00000556256 PRORYQ9H606 182 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 ASB7Q9H672 318 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 TRIM45Q9H8W5 580 aaPredicted RBP1.35□□□□□ -2.19
SCFD1-218ENST00000556256 ZNF302Q9NR11 478 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 TMEM38BQ9NVV0 291 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 ZNF492Q9P255 531 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 FLVCR2Q9UPI3 526 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 AP3M1Q9Y2T2 418 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 KIAA1671Q9BY89 1806 aa1.35□□□□□ -2.19
SCFD1-218ENST00000556256 TRIP11Q15643 1979 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 SCN4AP35499 1836 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 A0A1W2PNN7 141 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 TVP23AA6NH52 213 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 C4orf51C9J302 202 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 KCNK2O95069 426 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 CD8AP01732 235 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 IGHG2P01859 326 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 IGKV4-1P06312 121 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 RHOCP08134 193 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 LIPCP11150 499 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 HRES1P13985 223 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 BGNP21810 368 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 CD34P28906 385 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 CARD18P57730 90 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 RPL10AP62906 217 aaKnown RBP1.34□□□□□ -2.19
SCFD1-218ENST00000556256 IL5RAQ01344 420 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 ZNF404Q494X3 552 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 SYT6Q5T7P8 510 aaPredicted RBP1.34□□□□□ -2.19
SCFD1-218ENST00000556256 WDR59Q6PJI9 974 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 FAM231DQ6ZW35 169 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 ADM2Q7Z4H4 148 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 ITPRIPQ8IWB1 547 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 NELFCDQ8IXH7 590 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 ZNF664Q8N3J9 261 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 ASCC1Q8N9N2 400 aaKnown RBP1.34□□□□□ -2.19
SCFD1-218ENST00000556256 OR4D6Q8NGJ1 314 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 OR4C13Q8NGP0 309 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 UBA3Q8TBC4 463 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 ITLN2Q8WWU7 325 aaPredicted RBP1.34□□□□□ -2.19
SCFD1-218ENST00000556256 YIPF5Q969M3 257 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 TVP23CQ96ET8 276 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 TM2D3Q9BRN9 247 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 MRPL20Q9BYC9 149 aaKnown RBP1.34□□□□□ -2.19
SCFD1-218ENST00000556256 SYT4Q9H2B2 425 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 ANKHQ9HCJ1 492 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 ABCB9Q9NP78 766 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 C12orf4Q9NQ89 552 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 ZNF229Q9UJW7 825 aa1.34□□□□□ -2.19
SCFD1-218ENST00000556256 SLC22A7Q9Y694 548 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms