RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 A0A0G2JK05 382 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 SRRM5B3KS81 715 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 CLDN25C9JDP6 229 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 LYNX1G3V0Z9 82 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 NDUFS8O00217 210 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 ANGPTL7O43827 346 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 SSX4O60224 188 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 LY6HO94772 140 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 PLATP00750 562 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 IGKV1D-12P01611 117 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 LYNX1P0DP58 116 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 RORCP51449 518 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 OR10A3P58181 314 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 RSU1Q15404 277 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 AWAT2Q6E213 333 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 ELP2Q6IA86 826 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 SFXN4Q6P4A7 337 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 PRSS57Q6UWY2 283 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 C1QL2Q7Z5L3 287 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 NR2C2APQ86WQ0 139 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 GCSAMQ8N6F7 178 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 OR4D6Q8NGJ1 314 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 RAB1CQ92928 201 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 SLAMF9Q96A28 289 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 TIMD4Q96H15 378 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 POM121Q96HA1 1249 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 ELL3Q9HB65 397 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-221ENST00000555773 SMURF1Q9HCE7 757 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 TREM2Q9NZC2 230 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 CACNG2Q9Y698 323 aa10.49□□□□□ -0.73
SHMT2-221ENST00000555773 CACNA1DQ01668 2161 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 PPIAL4EA0A075B759 164 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 TRAV38-1A0A0B4J264 116 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 PPIAL4DF5H284 164 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 LGALS8O00214 317 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 AKR7A2O43488 359 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 NXPH2O95156 264 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 BPNT1O95861 308 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 CYB5R3P00387 301 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-221ENST00000555773 CSTBP04080 98 aaKnown RBP10.48□□□□□ -0.73
SHMT2-221ENST00000555773 PPIAL4FP0DN26 164 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 ARSBP15848 533 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 MUC1P15941 1255 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-221ENST00000555773 GLRA1P23415 457 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 GIFP27352 417 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 SCAND1P57086 179 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 SPCS2Q15005 226 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 KCNJ8Q15842 424 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 DGUOKQ16854 277 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 MICBQ29980 383 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 TEX36Q5VZQ5 186 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 CLEC2AQ6UVW9 174 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 TGIF2LYQ8IUE0 185 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 KCNG3Q8TAE7 436 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 NDNFQ8TB73 568 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 FAM3DQ96BQ1 224 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 KCTD12Q96CX2 325 aaKnown RBP10.48□□□□□ -0.73
SHMT2-221ENST00000555773 MRPS24Q96EL2 167 aaKnown RBP10.48□□□□□ -0.73
SHMT2-221ENST00000555773 SEBOXQ9HB31 216 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-221ENST00000555773 HES4Q9HCC6 221 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 FBLN5Q9UBX5 448 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 DAPK2Q9UIK4 370 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 PPIAL4AQ9Y536 164 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 ASH1LQ9NR48 2969 aaKnown RBP10.48□□□□□ -0.73
SHMT2-221ENST00000555773 ITPR2Q14571 2701 aa10.48□□□□□ -0.73
SHMT2-221ENST00000555773 PPIHO43447 177 aaKnown RBP10.47□□□□□ -0.73
SHMT2-221ENST00000555773 NDUFA2O43678 99 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 SFTPBP07988 381 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 CALCBP10092 127 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 GTF2F2P13984 249 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 ZNF182P17025 639 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-221ENST00000555773 BCL3P20749 454 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 SOX6P35712 828 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 GPR6P46095 362 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-221ENST00000555773 NPBWR2P48146 333 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 CAV3P56539 151 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 FGF12P61328 243 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 HNRNPA0Q13151 305 aaKnown RBP10.47□□□□□ -0.73
SHMT2-221ENST00000555773 DYNC1I2Q13409 638 aaKnown RBP10.47□□□□□ -0.73
SHMT2-221ENST00000555773 CARTPTQ16568 116 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 SMIM21Q3B7S5 101 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 C2orf76Q3KRA6 126 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 SLC22A6Q4U2R8 563 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 IDNKQ5T6J7 187 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 HES5Q5TA89 166 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 SHEQ5VZ18 495 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 FIP1L1Q6UN15 594 aaKnown RBP10.47□□□□□ -0.73
SHMT2-221ENST00000555773 ACP7Q6ZNF0 438 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 DNM1P46Q6ZS02 220 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 OR2W3Q7Z3T1 314 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 LRRC28Q86X40 367 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-221ENST00000555773 FAM58AQ8N1B3 248 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 ZNF525Q8N782 197 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 BOLLQ8N9W6 283 aaKnown RBP10.47□□□□□ -0.73
SHMT2-221ENST00000555773 ACOT12Q8WYK0 555 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 FAM168AQ92567 244 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 PTX4Q96A99 478 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 C1orf147Q96MC9 270 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-221ENST00000555773 ZNF488Q96MN9 340 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 NKX3-1Q99801 234 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms