RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 OR5B21A6NL26 309 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 SLC31A2O15432 143 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 SOX15O60248 233 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 SCGB1D1O95968 90 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 COX5AP20674 150 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 DCTDP32321 178 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 PTGFRP43088 359 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 TAGLNQ01995 201 aaKnown RBP7.28□□□□□ -1.24
SYNE2-220ENST00000555612 TMUB2Q71RG4 321 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 DDA1Q9BW61 102 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 GPR35Q9HC97 309 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 OR6C3Q9NZP0 311 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 CLN8Q9UBY8 286 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 TRAPPC4Q9Y296 219 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 RCL1Q9Y2P8 373 aaKnown RBP7.28□□□□□ -1.24
SYNE2-220ENST00000555612 COL4A5P29400 1685 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 CDIPTO14735 213 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 SULT1A3P0DMM9 295 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 SULT1A4P0DMN0 295 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 MDH2P40926 338 aaKnown RBP7.28□□□□□ -1.24
SYNE2-220ENST00000555612 LPAR6P43657 344 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 LGALS7P47929 136 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 SPINK9Q5DT21 86 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 SLC25A30Q5SVS4 291 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 C6orf201Q7Z4U5 140 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 CALHM3Q86XJ0 350 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 OR2M3Q8NG83 312 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 GNPNAT1Q96EK6 184 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-220ENST00000555612 HEXA-AS1Q9H8Q6 139 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 TMEM74BQ9NUR3 256 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 GAB2Q9UQC2 676 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 POMT1Q9Y6A1 747 aa7.28□□□□□ -1.24
SYNE2-220ENST00000555612 CYR61O00622 381 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 RPL12P30050 165 aaKnown RBP7.27□□□□□ -1.25
SYNE2-220ENST00000555612 TMEM147Q9BVK8 224 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 TMPRSS13Q9BYE2 586 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 AAMDCQ9H7C9 122 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 IGHV3OR15-7A0A075B7D8 119 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 UBE2L5PA0A1B0GUS4 154 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 XKRY2A2RUG3 117 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 LRRC3CA6NJW4 275 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 PRSS23O95084 383 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 PEBP1P30086 187 aaKnown RBP7.27□□□□□ -1.25
SYNE2-220ENST00000555612 KCNJ3P48549 501 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 FBXW9Q5XUX1 488 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 ADAM5Q6NVV9 412 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 PXT1Q8NFP0 134 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 SLC25A40Q8TBP6 338 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 MED30Q96HR3 178 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 C12orf10Q9HB07 376 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 MSL2Q9HCI7 577 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 CACFD1Q9UGQ2 172 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 A1L4Q6 167 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 ASPDHA6ND91 283 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 PRSS44E7EML9 344 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 FOXS1O43638 330 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 EPXP11678 715 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 SP6Q3SY56 376 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 SLC35B4Q969S0 331 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 SIRT3Q9NTG7 399 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-220ENST00000555612 THYN1Q9P016 225 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 A0A1W2PPV9 198 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 K7ESF4 209 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 OR4E1P0C645 316 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 SLC25A4P12235 298 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 CD1EP15812 388 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 PCMT1P22061 227 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 GPNMBQ14956 572 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 AKIP1Q9NQ31 210 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 KRBOX1C9JBD0 128 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 E5RGE8 158 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 IGFBP7Q16270 282 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 RPUSD4Q96CM3 377 aaKnown RBP7.27□□□□□ -1.25
SYNE2-220ENST00000555612 SEBOXQ9HB31 216 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-220ENST00000555612 NSG2Q9Y328 171 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 URGCP-MRPS24S4R325 110 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 V9GYS6 101 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 SMCHD1A6NHR9 2005 aa7.27□□□□□ -1.25
SYNE2-220ENST00000555612 DBX1A6NMT0 343 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 MT-ND4LP03901 98 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 PDGFAP04085 211 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 MDP1Q86V88 176 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 LYSMD2Q8IV50 215 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 CDH26Q8IXH8 852 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 LILRB4Q8NHJ6 448 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 IGKV3-7A0A075B6H7 116 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF354AO60765 605 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-220ENST00000555612 METTL15P1P0C7V9 234 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 MRPS11P82912 194 aaKnown RBP7.26□□□□□ -1.25
SYNE2-220ENST00000555612 C12orf73Q69YU5 71 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 OR2H1Q9GZK4 316 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 ADGRL4Q9HBW9 690 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 TRBV23-1A0A0A0MS06 115 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 PSMB6P28072 239 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 HLXQ14774 488 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-220ENST00000555612 HMGN3Q15651 99 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 CD276Q5ZPR3 534 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 SPICQ8N5J4 248 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 OR4F17Q8NGA8 305 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 OR8B12Q8NGG6 310 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms