RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	EMC6	Q9BV81	110 aa		2.59	□□□□□ -1.99
KTN1-223	ENST00000555573	DRC3	Q9H069	523 aa		2.59	□□□□□ -1.99
KTN1-223	ENST00000555573	ING2	Q9H160	280 aa		2.59	□□□□□ -1.99
KTN1-223	ENST00000555573	C6orf50	Q9HD87	102 aa		2.59	□□□□□ -1.99
KTN1-223	ENST00000555573	LRRC42	Q9Y546	428 aa		2.59	□□□□□ -1.99
KTN1-223	ENST00000555573	FADS3	Q9Y5Q0	445 aa		2.59	□□□□□ -1.99
KTN1-223	ENST00000555573	NUP214	P35658	2090 aa	Predicted RBP	2.59	□□□□□ -2
KTN1-223	ENST00000555573		A8MUU9	505 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	PRAMEF26	H0Y7S4	382 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	SULT1C2	O00338	296 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	MANBA	O00462	879 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	SGCE	O43556	437 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	GATC	O43716	136 aa	Known RBP	2.59	□□□□□ -2
KTN1-223	ENST00000555573	CRTAP	O75718	401 aa	Predicted RBP	2.59	□□□□□ -2
KTN1-223	ENST00000555573	CYB5R3	P00387	301 aa	Predicted RBP	2.59	□□□□□ -2
KTN1-223	ENST00000555573	PTH	P01270	115 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	GIMD1	P0DJR0	217 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	HSPD1	P10809	573 aa	Known RBP	2.59	□□□□□ -2
KTN1-223	ENST00000555573	KDELR2	P33947	212 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	MAGEA3	P43357	314 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	CTAG1A	P78358	180 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	DMC1	Q14565	340 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	OR4D1	Q15615	310 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	CDKL4	Q5MAI5	379 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	STEAP4	Q687X5	459 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	PTRHD1	Q6GMV3	140 aa	Known RBP	2.59	□□□□□ -2
KTN1-223	ENST00000555573	SLC25A34	Q6PIV7	304 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	IGFL1	Q6UW32	110 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573		Q6ZSR6	202 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	OR2Y1	Q8NGV0	311 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	ENKUR	Q8TC29	256 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	2.59	□□□□□ -2
KTN1-223	ENST00000555573	OR5P2	Q8WZ92	322 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	ADTRP	Q96IZ2	230 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	SRR	Q9GZT4	340 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	TMEM100	Q9NV29	134 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	IMP3	Q9NV31	184 aa	Known RBP	2.59	□□□□□ -2
KTN1-223	ENST00000555573	CFL2	Q9Y281	166 aa		2.59	□□□□□ -2
KTN1-223	ENST00000555573	BRD4	O60885	1362 aa	Predicted RBP	2.58	□□□□□ -2
KTN1-223	ENST00000555573	TUBGCP6	Q96RT7	1819 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	IGKV6-21	A0A0C4DH24	114 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	COCH	O43405	550 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	CXCR1	P25024	350 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	GALR1	P47211	349 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	CDC34	P49427	236 aa	Predicted RBP	2.58	□□□□□ -2
KTN1-223	ENST00000555573	RGS6	P49758	472 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	BLVRA	P53004	296 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	CMC4	P56277	68 aa	Predicted RBP	2.58	□□□□□ -2
KTN1-223	ENST00000555573	DSTN	P60981	165 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	TSPAN5	P62079	268 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	FAM27D1	Q5T7N8	215 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	PLEKHG7	Q6ZR37	379 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	DNAAF3	Q8N9W5	541 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	TMEM159	Q96B96	161 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	ZNF396	Q96N95	335 aa	Predicted RBP	2.58	□□□□□ -2
KTN1-223	ENST00000555573	SFXN3	Q9BWM7	321 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	ZNF717	Q9BY31	904 aa	Predicted RBP	2.58	□□□□□ -2
KTN1-223	ENST00000555573	POTEKP	Q9BYX7	375 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	ARV1	Q9H2C2	271 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	OR51B5	Q9H339	312 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	IFT46	Q9NQC8	304 aa		2.58	□□□□□ -2
KTN1-223	ENST00000555573	COL4A4	P53420	1690 aa	Predicted RBP	2.58	□□□□□ -2
KTN1-223	ENST00000555573	CCL15-CCL14	A0A0B4J2E2	113 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	BTNL10	A8MVZ5	291 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573		F8VZ95	297 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	KLRC4-KLRK1	H3BQV0	150 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	PSPHP1	O15172	72 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	AQP9	O43315	295 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	GATB	O75879	557 aa	Known RBP	2.57	□□□□□ -2
KTN1-223	ENST00000555573	CDRT1	O95170	752 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	ZNF14	P17017	642 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-223	ENST00000555573	INCA1	Q0VD86	236 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	STX4	Q12846	297 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	ITGB3BP	Q13352	177 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-223	ENST00000555573	CCL15	Q16663	113 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	CA13	Q8N1Q1	262 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	TMEM105	Q8N8V8	129 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	SPANXA2-OT1	Q8N9U9	137 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	OR10Z1	Q8NGY1	313 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	TMEM234	Q8WY98	164 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	RMI2	Q96E14	147 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	C20orf144	Q9BQM9	153 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	SCRT1	Q9BWW7	348 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	PARD6G	Q9BYG4	376 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-223	ENST00000555573	PORCN	Q9H237	461 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	SLC38A1	Q9H2H9	487 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	PLEKHF2	Q9H8W4	249 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	HEBP1	Q9NRV9	189 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	NLE1	Q9NVX2	485 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-223	ENST00000555573	MARCO	Q9UEW3	520 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-223	ENST00000555573	VAX2	Q9UIW0	290 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	NDRG2	Q9UN36	371 aa	Known RBP	2.57	□□□□□ -2
KTN1-223	ENST00000555573	ADAMTSL3	P82987	1691 aa		2.57	□□□□□ -2
KTN1-223	ENST00000555573	USP42	Q9H9J4	1324 aa	Known RBP	2.57	□□□□□ -2
KTN1-223	ENST00000555573	IGHV1-3	A0A0C4DH29	117 aa		2.56	□□□□□ -2
KTN1-223	ENST00000555573	GOLGA8J	A6NMD2	632 aa		2.56	□□□□□ -2
KTN1-223	ENST00000555573	LGALS9	O00182	355 aa		2.56	□□□□□ -2
KTN1-223	ENST00000555573	PSIP1	O75475	530 aa	Known RBP	2.56	□□□□□ -2
KTN1-223	ENST00000555573	TTC4	O95801	387 aa		2.56	□□□□□ -2
KTN1-223	ENST00000555573	GOLGA8H	P0CJ92	632 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms