RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 MEIOCA2RUB1 952 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 ALPLP05186 524 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 CEBPDP49716 269 aaPredicted RBP11.29□□□□□ -0.6
PCNX4-209ENST00000555569 ZNF85Q03923 595 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 IL24Q13007 206 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 TAF9Q16594 264 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 TP53I3Q53FA7 332 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 HCP5Q6MZN7 132 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 FAM220AQ7Z4H9 259 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 CALHM1Q8IU99 346 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 BATF2Q8N1L9 274 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 HES4Q9HCC6 221 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 OR14J1Q9UGF5 321 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 GNG8Q9UK08 70 aa11.29□□□□□ -0.6
PCNX4-209ENST00000555569 SF3B6Q9Y3B4 125 aaKnown RBP11.29□□□□□ -0.6
PCNX4-209ENST00000555569 A0A1W2PPH5 198 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 EI24O14681 340 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 ANGPTL7O43827 346 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 GATBO75879 557 aaKnown RBP11.28□□□□□ -0.6
PCNX4-209ENST00000555569 KIR3DL2P43630 455 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 ISL1P61371 349 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 ERVK11-1P61568 191 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 RPL31P62899 125 aaKnown RBP11.28□□□□□ -0.6
PCNX4-209ENST00000555569 SRSF4Q08170 494 aaKnown RBP11.28□□□□□ -0.6
PCNX4-209ENST00000555569 KPNB1Q14974 876 aaKnown RBP11.28□□□□□ -0.6
PCNX4-209ENST00000555569 UBE2V2Q15819 145 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 ZFP1Q6P2D0 407 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 PRSS35Q8N3Z0 413 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 UBE2FQ969M7 185 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 RNF166Q96A37 237 aaPredicted RBP11.28□□□□□ -0.6
PCNX4-209ENST00000555569 HRASLS5Q96KN8 279 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 USE1Q9NZ43 259 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 VPREB3Q9UKI3 123 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 RNF114Q9Y508 228 aa11.28□□□□□ -0.6
PCNX4-209ENST00000555569 LOC107986453A0A1B0GWG9 222 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 H3BNX3 289 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 ENTPD6O75354 484 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 SERPINA3P01011 423 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 TK1P04183 234 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 UBCP0CG48 685 aaKnown RBP11.27□□□□□ -0.61
PCNX4-209ENST00000555569 FUT6P51993 359 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 ZIK1Q3SY52 487 aaPredicted RBP11.27□□□□□ -0.61
PCNX4-209ENST00000555569 MIDNQ504T8 468 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 TMEM200BQ69YZ2 307 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 DHRS7BQ6IAN0 325 aaPredicted RBP11.27□□□□□ -0.61
PCNX4-209ENST00000555569 BRICD5Q6PL45 260 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 TREML4Q6UXN2 200 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 CCDC121Q6ZUS5 278 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 MKXQ8IYA7 352 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 ZSCAN4Q8NAM6 433 aaPredicted RBP11.27□□□□□ -0.61
PCNX4-209ENST00000555569 OR4M1Q8NGD0 313 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 OR5R1Q8NH85 324 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 LINC01006Q8NI28 216 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 C10orf35Q96D05 121 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 RNFT2Q96EX2 444 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 CEP19Q96LK0 163 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 CHST5Q9GZS9 411 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 FAM234AQ9H0X4 552 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 HEXA-AS1Q9H8Q6 139 aa11.27□□□□□ -0.61
PCNX4-209ENST00000555569 IGKV1-27A0A075B6S5 117 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 E9PQ18 207 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 ALDH3A2P51648 485 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 SNRPGP62308 76 aaKnown RBP11.26□□□□□ -0.61
PCNX4-209ENST00000555569 ACTC1P68032 377 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 ACTA1P68133 377 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 COL10A1Q03692 680 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 CNN3Q15417 329 aaKnown RBP11.26□□□□□ -0.61
PCNX4-209ENST00000555569 OCLNQ16625 522 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 SLC25A30Q5SVS4 291 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 TMEM244Q5VVB8 128 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 MEDAGQ5VYS4 303 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 Q6ZSV7 163 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 KCTD20Q7Z5Y7 419 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 RDH10Q8IZV5 341 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 C11orf42Q8N5U0 333 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 BEND2Q8NDZ0 799 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 OR2G2Q8NGZ5 317 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 C17orf50Q8WW18 174 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 PP6455Q8WZ26 134 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 SLAMF9Q96A28 289 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 BORCS8Q96FH0 119 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 CITED1Q99966 193 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 MTCH1Q9NZJ7 389 aa11.26□□□□□ -0.61
PCNX4-209ENST00000555569 hCG_1809904A0A1W2PP81 198 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 A0A1W2PPE2 198 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 A0A1W2PR64 198 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 A0A1W2PRV1 198 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 DAPL1A0PJW8 107 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 J3QRE1 110 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 K7N7A8 449 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 CLPXO76031 633 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 CHRM2P08172 466 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 CCL3L1P16619 93 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 TGFBR2P37173 567 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 PROK1P58294 105 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 ZNF273Q14593 569 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 FDX2Q6P4F2 183 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 SLC25A26Q70HW3 274 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 CBR4Q8N4T8 237 aa11.25□□□□□ -0.61
PCNX4-209ENST00000555569 ASCC1Q8N9N2 400 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms