RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 FAM166AQ6J272 317 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 ACP7Q6ZNF0 438 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 C1QL2Q7Z5L3 287 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 TPRA1Q86W33 373 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 Q8IYB0 196 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 MUC20Q8N307 709 aaPredicted RBP10.62□□□□□ -0.71
SYNE2-219ENST00000555323 PNLDC1Q8NA58 520 aaKnown RBP10.62□□□□□ -0.71
SYNE2-219ENST00000555323 RFT1Q96AA3 541 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 CEP19Q96LK0 163 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 KCTD7Q96MP8 289 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 GPER1Q99527 375 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 GFI1Q99684 422 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 CHCHD6Q9BRQ6 235 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 CENPOQ9BU64 300 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 WDR13Q9H1Z4 485 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 CNTD2Q9H8S5 307 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 EXOSC4Q9NPD3 245 aaKnown RBP10.62□□□□□ -0.71
SYNE2-219ENST00000555323 AK6Q9Y3D8 172 aaKnown RBP10.62□□□□□ -0.71
SYNE2-219ENST00000555323 AKAP9Q99996 3911 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 CCDC168Q8NDH2 2452 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 IGHV4-61A0A0C4DH41 118 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 F8VVB4 439 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 F8VWA3 439 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 PDCD5O14737 125 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 WNT9BO14905 357 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 SLC22A1O15245 554 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 ANGPTL7O43827 346 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 ZNF205O95201 554 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 TMEM225BP0DP42 221 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 MYL9P24844 172 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 OR3A4PP47883 348 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 NPBWR2P48146 333 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 POU3F4P49335 361 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 LMO4P61968 165 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 MICBQ29980 383 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 DCDC5Q6ZRR9 648 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 GPR141Q7Z602 305 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 SPICQ8N5J4 248 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 JAGN1Q8N5M9 183 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 OR5D18Q8NGL1 313 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 ANGPTL6Q8NI99 470 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 TNFAIP8L1Q8WVP5 186 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 SLAMF9Q96A28 289 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 ZNF488Q96MN9 340 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 TMEM246Q9BRR3 403 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 DNTTIP1Q9H147 329 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 IL36GQ9NZH8 169 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 KAAG1Q9UBP8 84 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 GHRLQ9UBU3 117 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 V9GY05 133 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 VPS13CQ709C8 3753 aa10.61□□□□□ -0.71
SYNE2-219ENST00000555323 SETXQ7Z333 2677 aaKnown RBP10.6□□□□□ -0.71
SYNE2-219ENST00000555323 LOC100506127A0A0U1RQW1 187 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 C3orf80F5H4A9 247 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 TRAPPC2LH3BP13 241 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 HAX1O00165 279 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 ZNF780AO75290 641 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-219ENST00000555323 PLATP00750 562 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 KNG1P01042 644 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 SFTPBP07988 381 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 WNT2P09544 360 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 AMY2BP19961 511 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 BCL3P20749 454 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 CD80P33681 288 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 RANBP1P43487 201 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 BMXP51813 675 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 GPR176Q14439 515 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 ZNF146Q15072 292 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 CTF1Q16619 201 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 STUMQ69YW2 141 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 SLC16A12Q6ZSM3 486 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 BOLLQ8N9W6 283 aaKnown RBP10.6□□□□□ -0.71
SYNE2-219ENST00000555323 C19orf18Q8NEA5 215 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 DEFB108BQ8NET1 73 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 OR4D6Q8NGJ1 314 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 CLDND2Q8NHS1 167 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 TBC1D15Q8TC07 691 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 SLC25A28Q96A46 364 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 SEH1LQ96EE3 360 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 C1orf159Q96HA4 380 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 C1orf147Q96MC9 270 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-219ENST00000555323 RNF167Q9H6Y7 350 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 PATZ1Q9HBE1 687 aaKnown RBP10.6□□□□□ -0.71
SYNE2-219ENST00000555323 SMURF1Q9HCE7 757 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 HMG20AQ9NP66 347 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 NLKQ9UBE8 527 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 MIOXQ9UGB7 285 aa10.6□□□□□ -0.71
SYNE2-219ENST00000555323 A0A0G2JK05 382 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 OR2AT4A6NND4 320 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 F5H0A9 414 aaPredicted RBP10.59□□□□□ -0.71
SYNE2-219ENST00000555323 SLC17A2O00624 439 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 NXPH2O95156 264 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 GABARAPO95166 117 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 CDRT1O95170 752 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 PSG2P11465 335 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 RAB3BP20337 219 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 HTR2CP28335 458 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 SDC2P34741 201 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 FGF12P61328 243 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms