RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 LYNX1G3V0Z9 82 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 PTBP3O95758 552 aaKnown RBP9.2□□□□□ -0.94
SHMT2-218ENST00000555213 HEXAP06865 529 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 GRPP07492 148 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 LYNX1P0DP58 116 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 COL8A2P25067 703 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 NR4A2P43354 598 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 GPM6AP51674 278 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 EFNB2P52799 333 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 PPP5CP53041 499 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 PPP3R1P63098 170 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 MAB21L1Q13394 359 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 RIN1Q13671 783 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 ZNF846Q147U1 533 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 P2RY14Q15391 338 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 ZNF79Q15937 498 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 ZNF181Q2M3W8 571 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 GLT8D1Q68CQ7 371 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 MZT2AQ6P582 158 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 C1QL2Q7Z5L3 287 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 CMTM4Q8IZR5 234 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 DTX3Q8N9I9 347 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 OR51D1Q8NGF3 324 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 OR5A2Q8NGI9 324 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 LGALS14Q8TCE9 139 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 Q8TCH9 128 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 HPSE2Q8WWQ2 592 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 S100ZQ8WXG8 99 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 CPNE2Q96FN4 548 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-218ENST00000555213 CMTM3Q96MX0 182 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 SPACA5Q96QH8 159 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 BPESC1Q9GZL8 116 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 KCNK15Q9H427 330 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 LIN7BQ9HAP6 207 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 PLGRKTQ9HBL7 147 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 UFSP2Q9NUQ7 469 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 C1orf123Q9NWV4 160 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 TREM2Q9NZC2 230 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 CKLFQ9UBR5 152 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 CACNG2Q9Y698 323 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 C2CD3Q4AC94 2353 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 ZNF732B4DXR9 585 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 H7C1Q1 480 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 RGS5O15539 181 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 USF1P22415 310 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-218ENST00000555213 PRKACBP22694 351 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 HTR2CP28335 458 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 S100A5P33763 92 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 ZP1P60852 638 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 ZNF45Q02386 682 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 SPRNQ5BIV9 151 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 DDI2Q5TDH0 399 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 CNIH2Q6PI25 160 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 ASCL4Q6XD76 172 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 ZNF573Q86YE8 665 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 MUC20Q8N307 709 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-218ENST00000555213 SAMD12Q8N8I0 201 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 OR4M1Q8NGD0 313 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 SPSB1Q96BD6 273 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 FAM3DQ96BQ1 224 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 FOXRED1Q96CU9 486 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-218ENST00000555213 DIRAS2Q96HU8 199 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 UQCC2Q9BRT2 126 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 REG4Q9BYZ8 158 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 ABCG5Q9H222 651 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 METTL17Q9H7H0 456 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-218ENST00000555213 RNF7Q9UBF6 113 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 CSMD1Q96PZ7 3565 aa9.19□□□□□ -0.94
SHMT2-218ENST00000555213 LOC100289279A0A1B0GTE1 492 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 TMEM272A0A1B0GTI8 110 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 VWC2LB2RUY7 222 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 RNF223E7ERA6 249 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 TMEM178BH3BS89 294 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 MAGEB3O15480 346 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 APOA1P02647 267 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 AZGP1P25311 298 aaKnown RBP9.18□□□□□ -0.94
SHMT2-218ENST00000555213 ZNF93P35789 620 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-218ENST00000555213 FUT6P51993 359 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 SCAND1P57086 179 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 BTG1P62324 171 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 ZNF154Q13106 437 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 KISS1Q15726 138 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 MPPED2Q15777 294 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 KCNJ8Q15842 424 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 RAB11BQ15907 218 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 AVPI1Q5T686 147 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 OR10K2Q6IF99 312 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 METAP1DQ6UB28 335 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-218ENST00000555213 ANGPTL5Q86XS5 388 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 SNX29P2Q8IUI4 249 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 SPICQ8N5J4 248 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 NKAIN3Q8N8D7 197 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 OR6M1Q8NGM8 313 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 NPRL2Q8WTW4 380 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 BORCS8Q96FH0 119 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 ABHD1Q96SE0 405 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 GAL3ST1Q99999 423 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 MRI1Q9BV20 369 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 SRRQ9GZT4 340 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 TLNRD1Q9H1K6 362 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms