RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 ANGPTL7O43827 346 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 PRAF2O60831 178 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 GLI4P10075 376 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 SERPINA2P20848 420 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 CHATP28329 748 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 RAD52P43351 418 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 ARHGDIBP52566 201 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 TBC1D28Q2M2D7 210 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 EIF2S3LQ2VIR3 472 aaKnown RBP7.62□□□□□ -1.19
TDP1-210ENST00000554976 C3orf36Q3SXR2 165 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 PLCXD3Q63HM9 321 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 TMEM200AQ86VY9 491 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 CSNK2A3Q8NEV1 391 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 OR51S1Q8NGJ8 323 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 POM121Q96HA1 1249 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 OBP2BQ9NPH6 170 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 MCUBQ9NWR8 336 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 JKAMPQ9P055 326 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 MBD2Q9UBB5 411 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 CD300LBA8K4G0 201 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 ARPC1BO15143 372 aaKnown RBP7.62□□□□□ -1.19
TDP1-210ENST00000554976 GZMKP49863 264 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 ATP1B3P54709 279 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 TMPRSS3P57727 454 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 ERVS71-1P61550 626 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 PLP2Q04941 152 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 P2RY6Q15077 328 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 FAM189A2Q15884 450 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 FAM76BQ5HYJ3 339 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 ZNF626Q68DY1 528 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 HOGA1Q86XE5 327 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 CNEP1R1Q8N9A8 125 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 PIGCQ92535 297 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 PHF21AQ96BD5 680 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 BORCS8Q96FH0 119 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 CPNE2Q96FN4 548 aaPredicted RBP7.62□□□□□ -1.19
TDP1-210ENST00000554976 URM1Q9BTM9 101 aaKnown RBP7.62□□□□□ -1.19
TDP1-210ENST00000554976 ALX4Q9H161 411 aaPredicted RBP7.62□□□□□ -1.19
TDP1-210ENST00000554976 METTL9Q9H1A3 318 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 OR10A4Q9H209 315 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 OR51J1Q9H342 316 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 LUZP4Q9P127 313 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 PROCRQ9UNN8 238 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 ESPL1Q14674 2120 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 DMXL2Q8TDJ6 3036 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 CHD3Q12873 2000 aaKnown RBP7.62□□□□□ -1.19
TDP1-210ENST00000554976 IGHV1-18A0A0C4DH31 117 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 IQCF6A8MYZ5 107 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 M0QYG6 137 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 SNAPINO95295 136 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 OPRM1P35372 400 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 PMELP40967 661 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 HOXA1P49639 335 aaPredicted RBP7.62□□□□□ -1.19
TDP1-210ENST00000554976 TGFBR3Q03167 851 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 MALLQ13021 153 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 PPA1Q15181 289 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 FCN2Q15485 313 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 Q3ZCU0 254 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 VAX1Q5SQQ9 334 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 OR52W1Q6IF63 320 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 MRPL21Q7Z2W9 205 aaKnown RBP7.62□□□□□ -1.19
TDP1-210ENST00000554976 ZDHHC23Q8IYP9 409 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 OR5A2Q8NGI9 324 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 OR51T1Q8NGJ9 327 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 EMG1Q92979 244 aaKnown RBP7.62□□□□□ -1.19
TDP1-210ENST00000554976 MRPS24Q96EL2 167 aaKnown RBP7.62□□□□□ -1.19
TDP1-210ENST00000554976 MARS2Q96GW9 593 aaKnown RBP7.62□□□□□ -1.19
TDP1-210ENST00000554976 HS3ST6Q96QI5 342 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 SFXN3Q9BWM7 321 aa7.62□□□□□ -1.19
TDP1-210ENST00000554976 C1QTNF9BB2RNN3 333 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 F8VVB4 439 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 F8VWA3 439 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 ST8SIA5O15466 376 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 AGFG2O95081 481 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 DHFRP00374 187 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 ZNF250P15622 560 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 CXCL3P19876 107 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 ANXA7P20073 488 aaKnown RBP7.61□□□□□ -1.19
TDP1-210ENST00000554976 TBPP20226 339 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 CCNOP22674 350 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 CPT2P23786 658 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 CALCRP30988 508 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 FAUP35544 74 aaKnown RBP7.61□□□□□ -1.19
TDP1-210ENST00000554976 RBM11P57052 281 aaKnown RBP7.61□□□□□ -1.19
TDP1-210ENST00000554976 ZMYND11Q15326 602 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 MICBQ29980 383 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 BHLHA15Q7RTS1 189 aaPredicted RBP7.61□□□□□ -1.19
TDP1-210ENST00000554976 DOLPP1Q86YN1 238 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 ZNF611Q8N823 705 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 RCC2Q9P258 522 aaKnown RBP7.61□□□□□ -1.19
TDP1-210ENST00000554976 TUBD1Q9UJT1 453 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 MPC1Q9Y5U8 109 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 MGAQ8IWI9 3026 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 MEIKINA0A087WXM9 373 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 OR5H1A6NKK0 313 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 SERPINE3A8MV23 424 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 ZNF736B4DX44 427 aaPredicted RBP7.61□□□□□ -1.19
TDP1-210ENST00000554976 RAB3DO95716 219 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 C1QBP02746 253 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 CECR9P0C854 216 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms