RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CSNK1A1P48729 337 aa15.03■□□□□ -0
SHOX-204ENST00000554971 CX3CR1P49238 355 aa15.03■□□□□ -0
SHOX-204ENST00000554971 UBE2MP61081 183 aaKnown RBP15.03■□□□□ -0
SHOX-204ENST00000554971 FAM27E3Q08E93 113 aa15.03■□□□□ -0
SHOX-204ENST00000554971 ARL6IP1Q15041 203 aa15.03■□□□□ -0
SHOX-204ENST00000554971 C2orf68Q2NKX9 166 aa15.03■□□□□ -0
SHOX-204ENST00000554971 Q6ZT83 130 aa15.03■□□□□ -0
SHOX-204ENST00000554971 RFPL4BQ6ZWI9 263 aa15.03■□□□□ -0
SHOX-204ENST00000554971 OR5AS1Q8N127 324 aa15.03■□□□□ -0
SHOX-204ENST00000554971 OR5M8Q8NGP6 311 aa15.03■□□□□ -0
SHOX-204ENST00000554971 ZNF837Q96EG3 531 aaPredicted RBP15.03■□□□□ -0
SHOX-204ENST00000554971 ALKBH3Q96Q83 286 aaPredicted RBP15.03■□□□□ -0
SHOX-204ENST00000554971 NELFAQ9H3P2 528 aa15.03■□□□□ -0
SHOX-204ENST00000554971 GPR84Q9NQS5 396 aa15.03■□□□□ -0
SHOX-204ENST00000554971 AKAP6Q13023 2319 aa15.03■□□□□ -0
SHOX-204ENST00000554971 PLCE1Q9P212 2302 aa15.03■□□□□ -0
SHOX-204ENST00000554971 ARPC5O15511 151 aa15.02■□□□□ -0
SHOX-204ENST00000554971 CRYZL1O95825 349 aa15.02■□□□□ -0
SHOX-204ENST00000554971 IGLV3-1P01715 115 aa15.02■□□□□ -0
SHOX-204ENST00000554971 SLC25A4P12235 298 aa15.02■□□□□ -0
SHOX-204ENST00000554971 CD34P28906 385 aa15.02■□□□□ -0
SHOX-204ENST00000554971 PRKXP51817 358 aa15.02■□□□□ -0
SHOX-204ENST00000554971 TAS2R31P59538 309 aa15.02■□□□□ -0
SHOX-204ENST00000554971 HIST1H3AP68431 136 aa15.02■□□□□ -0
SHOX-204ENST00000554971 ECH1Q13011 328 aa15.02■□□□□ -0
SHOX-204ENST00000554971 DHRS2Q13268 280 aa15.02■□□□□ -0
SHOX-204ENST00000554971 TOR2AQ5JU69 321 aa15.02■□□□□ -0
SHOX-204ENST00000554971 HIST2H3PS2Q5TEC6 136 aa15.02■□□□□ -0
SHOX-204ENST00000554971 CARD17Q5XLA6 110 aa15.02■□□□□ -0
SHOX-204ENST00000554971 FBXW9Q5XUX1 488 aa15.02■□□□□ -0
SHOX-204ENST00000554971 HIST2H3AQ71DI3 136 aa15.02■□□□□ -0
SHOX-204ENST00000554971 SLC51BQ86UW2 128 aa15.02■□□□□ -0
SHOX-204ENST00000554971 ZNF283Q8N7M2 679 aa15.02■□□□□ -0
SHOX-204ENST00000554971 OR56B1Q8NGI3 324 aa15.02■□□□□ -0
SHOX-204ENST00000554971 URM1Q9BTM9 101 aaKnown RBP15.02■□□□□ -0
SHOX-204ENST00000554971 RBM24Q9BX46 236 aaKnown RBP15.02■□□□□ -0
SHOX-204ENST00000554971 MRPS28Q9Y2Q9 187 aaKnown RBP15.02■□□□□ -0
SHOX-204ENST00000554971 A1L4Q6 167 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 IFNA6P05013 189 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 PRF1P14222 555 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 ZBTB25P24278 435 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 CDAP32320 146 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 DCAF12L2Q5VW00 463 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 GSG1LQ6UXU4 331 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 TMED4Q7Z7H5 227 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 LYG2Q86SG7 212 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 NAA40Q86UY6 237 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 ZNF101Q8IZC7 436 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 C17orf50Q8WW18 174 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 PSMG3-AS1Q96PY0 264 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 LPAR5Q9H1C0 372 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 ZMAT3Q9HA38 289 aaKnown RBP15.02□□□□□ -0.01
SHOX-204ENST00000554971 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.02□□□□□ -0.01
SHOX-204ENST00000554971 NUP50Q9UKX7 468 aa15.02□□□□□ -0.01
SHOX-204ENST00000554971 SPG11Q96JI7 2443 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 FXYD6-FXYD2A0A087WZ82 144 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 RER1O15258 196 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 SIX6O95475 246 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 IGHV1-2P23083 117 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 THBS4P35443 961 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 SNTB1Q13884 538 aaKnown RBP15.01□□□□□ -0.01
SHOX-204ENST00000554971 AANATQ16613 207 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 SCGB2B2Q4G0G5 96 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 LY6G6FQ5SQ64 297 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 GLIPR1L1Q6UWM5 242 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 BEND4Q6ZU67 534 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 C22orf34Q6ZV56 151 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 COMMD2Q86X83 199 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 C20orf196Q8IYI0 205 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 PNLDC1Q8NA58 520 aaKnown RBP15.01□□□□□ -0.01
SHOX-204ENST00000554971 STEAP2Q8NFT2 490 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 OR14K1Q8NGZ2 314 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 MITD1Q8WV92 249 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 SCGB3A2Q96PL1 93 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 NKX3-1Q99801 234 aaPredicted RBP15.01□□□□□ -0.01
SHOX-204ENST00000554971 SELENOIQ9C0D9 397 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 MFFQ9GZY8 342 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 ARL6Q9H0F7 186 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 FXYD6Q9H0Q3 95 aa15.01□□□□□ -0.01
SHOX-204ENST00000554971 POLQO75417 2590 aa15□□□□□ -0.01
SHOX-204ENST00000554971 CNOT4O95628 575 aaKnown RBP15□□□□□ -0.01
SHOX-204ENST00000554971 COX5AP20674 150 aa15□□□□□ -0.01
SHOX-204ENST00000554971 BAMBIQ13145 260 aa15□□□□□ -0.01
SHOX-204ENST00000554971 ZNF345Q14585 488 aa15□□□□□ -0.01
SHOX-204ENST00000554971 TSC22D1Q15714 1073 aa15□□□□□ -0.01
SHOX-204ENST00000554971 VAX1Q5SQQ9 334 aa15□□□□□ -0.01
SHOX-204ENST00000554971 ARRDC1Q8N5I2 433 aa15□□□□□ -0.01
SHOX-204ENST00000554971 PP6455Q8WZ26 134 aa15□□□□□ -0.01
SHOX-204ENST00000554971 RNASE6Q93091 150 aaKnown RBP15□□□□□ -0.01
SHOX-204ENST00000554971 C1orf147Q96MC9 270 aaPredicted RBP15□□□□□ -0.01
SHOX-204ENST00000554971 GAL3ST1Q99999 423 aa15□□□□□ -0.01
SHOX-204ENST00000554971 OCSTAMPQ9BR26 566 aa15□□□□□ -0.01
SHOX-204ENST00000554971 ZNF416Q9BWM5 594 aa15□□□□□ -0.01
SHOX-204ENST00000554971 CST11Q9H112 138 aa15□□□□□ -0.01
SHOX-204ENST00000554971 COMMD9Q9P000 198 aa15□□□□□ -0.01
SHOX-204ENST00000554971 MYEF2Q9P2K5 600 aaKnown RBP15□□□□□ -0.01
SHOX-204ENST00000554971 VPS13CQ709C8 3753 aa15□□□□□ -0.01
SHOX-204ENST00000554971 A0A1B0GW55 424 aa15□□□□□ -0.01
SHOX-204ENST00000554971 CEACAM18A8MTB9 384 aa15□□□□□ -0.01
SHOX-204ENST00000554971 FCER2P06734 321 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms