RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 VCX3BQ9H321 246 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 TAS2R4Q9NYW5 299 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 KAAG1Q9UBP8 84 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 LPAR3Q9UBY5 353 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 OR5V1Q9UGF6 321 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 SLC7A11Q9UPY5 501 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 DHDHQ9UQ10 334 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 MAB21L2Q9Y586 359 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 SOX21Q9Y651 276 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-214ENST00000554928 IGHV3OR16-10A0A075B7F0 116 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 PPIAL4CA0A0B4J2A2 164 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 IGKV1-12A0A0C4DH73 117 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 ANGPTL7O43827 346 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 NOS1APO75052 506 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-214ENST00000554928 IGKV1D-12P01611 117 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 SRP14P37108 136 aaKnown RBP10.23□□□□□ -0.77
SYNE2-214ENST00000554928 GABRA2P47869 451 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 NPBWR2P48146 333 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 POU3F4P49335 361 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 IL24Q13007 206 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 CCDC58Q4VC31 144 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 ATPAF1Q5TC12 328 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-214ENST00000554928 SLC25A26Q70HW3 274 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 BTN2A1Q7KYR7 527 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 PARP16Q8N5Y8 322 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 ZNRF1Q8ND25 227 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 OR5D18Q8NGL1 313 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 ST8SIA4Q92187 359 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 GHSRQ92847 366 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 C12orf43Q96C57 262 aaKnown RBP10.23□□□□□ -0.77
SYNE2-214ENST00000554928 SMIM19Q96E16 107 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 OPALINQ96PE5 141 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 MYCBPQ99417 103 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-214ENST00000554928 NUDT16L1Q9BRJ7 211 aaKnown RBP10.23□□□□□ -0.77
SYNE2-214ENST00000554928 PKIBQ9C010 78 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 DUSP21Q9H596 190 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 ZCCHC4Q9H5U6 513 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 HES4Q9HCC6 221 aa10.23□□□□□ -0.77
SYNE2-214ENST00000554928 CHCHD3Q9NX63 227 aaKnown RBP10.23□□□□□ -0.77
SYNE2-214ENST00000554928 LSM2Q9Y333 95 aaKnown RBP10.23□□□□□ -0.77
SYNE2-214ENST00000554928 WNK2Q9Y3S1 2297 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 TRBV5-5A0A0J9YX44 114 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 KIR2DS1A0A191URI9 304 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 MAGEA13PA6NCF6 341 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 RFPL4AA6NLU0 287 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 RFPL4AL1F8VTS6 287 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 J3QLI3 93 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 MYL12BO14950 172 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 NDUFA2O43678 99 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 RGS9O75916 674 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-214ENST00000554928 NXPH2O95156 264 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 SERPINA3P01011 423 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 ACAA1P09110 424 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-214ENST00000554928 BCL3P20749 454 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 HNF1AP20823 631 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 CRHBPP24387 322 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 MAP2K4P45985 399 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 RBP2P50120 134 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 MTCP1P56278 107 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 WNT4P56705 351 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 INSL4Q14641 139 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 CNN3Q15417 329 aaKnown RBP10.22□□□□□ -0.77
SYNE2-214ENST00000554928 KCNJ8Q15842 424 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 ZNF529Q6P280 563 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 C1QL2Q7Z5L3 287 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 DNAAF1Q8NEP3 725 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 TRIM36Q9NQ86 728 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 RBFOX1Q9NWB1 397 aaKnown RBP10.22□□□□□ -0.77
SYNE2-214ENST00000554928 RAB26Q9ULW5 256 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 ZNF281Q9Y2X9 895 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 AUP1Q9Y679 476 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 MXRA5Q9NR99 2828 aa10.22□□□□□ -0.77
SYNE2-214ENST00000554928 A0A1W2PPK0 400 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 SIGLEC5O15389 551 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 PIN1P1O15428 100 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 SFTPBP07988 381 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 RPSAP08865 295 aaKnown RBP10.21□□□□□ -0.77
SYNE2-214ENST00000554928 IGHV4-38-2P0DP08 117 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 CELP19835 753 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 PCMT1P22061 227 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 PRKACBP22694 351 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 CPT2P23786 658 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 HSPA13P48723 471 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 ATP1B3P54709 279 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 SNU13P55769 128 aaKnown RBP10.21□□□□□ -0.77
SYNE2-214ENST00000554928 DLX1P56177 255 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 ZP1P60852 638 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 FGF12P61328 243 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 PRB3Q04118 309 aaPredicted RBP10.21□□□□□ -0.77
SYNE2-214ENST00000554928 RNLSQ5VYX0 342 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 GPR148Q8TDV2 347 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 C22orf15Q8WYQ4 148 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 SPSB1Q96BD6 273 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 CEP19Q96LK0 163 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 CDCA4Q9BXL8 241 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 SCN3BQ9NY72 215 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 OR14J1Q9UGF5 321 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 POLDIP2Q9Y2S7 368 aa10.21□□□□□ -0.77
SYNE2-214ENST00000554928 FBN1P35555 2871 aaKnown RBP10.2□□□□□ -0.78
SYNE2-214ENST00000554928 TRAV8-7A0A075B6U6 113 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms