RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ATF6BQ99941 703 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 WDR12Q9GZL7 423 aaKnown RBP8.81□□□□□ -1
SHMT2-215ENST00000554656 SLITRK2Q9H156 845 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 ZCCHC4Q9H5U6 513 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 UNKLQ9H9P5 680 aaKnown RBP8.81□□□□□ -1
SHMT2-215ENST00000554656 ZMAT3Q9HA38 289 aaKnown RBP8.81□□□□□ -1
SHMT2-215ENST00000554656 HMG20AQ9NP66 347 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 SNTG1Q9NSN8 517 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 FAM206AQ9NX38 181 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 OR52A1Q9UKL2 312 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 HHLA2Q9UM44 414 aa8.81□□□□□ -1
SHMT2-215ENST00000554656 C5orf63A6NC05 138 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 CLDN34H7C241 214 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 IFNL4K9M1U5 179 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 ACSM4P0C7M7 580 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 OCM2P0CE71 109 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 FSTP19883 344 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 RAB3BP20337 219 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 CALRP27797 417 aaKnown RBP8.8□□□□□ -1
SHMT2-215ENST00000554656 S100A5P33763 92 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 ETV6P41212 452 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 PSMD7P51665 324 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 MAB21L1Q13394 359 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 ZNF846Q147U1 533 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 ZNF181Q2M3W8 571 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 BCL2L15Q5TBC7 163 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 LYPD2Q6UXB3 125 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 ZNF841Q6ZN19 808 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 NAA40Q86UY6 237 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 C19orf18Q8NEA5 215 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 RAB40AQ8WXH6 277 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 SPTSSAQ969W0 71 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 NEIL1Q96FI4 390 aaPredicted RBP8.8□□□□□ -1
SHMT2-215ENST00000554656 WDFY2Q96P53 400 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 OR14A2Q96R54 314 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 MS4A7Q9GZW8 240 aaPredicted RBP8.8□□□□□ -1
SHMT2-215ENST00000554656 PALMDQ9NP74 551 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 WNK1Q9H4A3 2382 aa8.8□□□□□ -1
SHMT2-215ENST00000554656 A0A0U1RQV5 110 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 SHISA3A0PJX4 238 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 NOTOA8MTQ0 251 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 C22orf46C9J442 243 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 FCN3O75636 299 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 FSTL3O95633 263 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 PPIAL4GP0DN37 164 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 SRMP19623 302 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 MDKP21741 143 aaPredicted RBP8.79□□□□□ -1
SHMT2-215ENST00000554656 CCL1P22362 96 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 RANBP1P43487 201 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 GATA4P43694 442 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 PITPNBP48739 271 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 SRP9P49458 86 aaKnown RBP8.79□□□□□ -1
SHMT2-215ENST00000554656 GNB2P62879 340 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 MXD1Q05195 221 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 MFGE8Q08431 387 aaPredicted RBP8.79□□□□□ -1
SHMT2-215ENST00000554656 GK2Q14410 553 aaPredicted RBP8.79□□□□□ -1
SHMT2-215ENST00000554656 INSL4Q14641 139 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 MPPED2Q15777 294 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 PRAMEF6Q5VXH4 476 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 MZT2AQ6P582 158 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 DRAM2Q6UX65 266 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 BRD3OSQ6XYD6 125 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 Q6ZSR3 168 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 SPATC1Q76KD6 591 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 OR5L1Q8NGL2 311 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 OR13C5Q8NGS8 318 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 BARHL1Q9BZE3 327 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 PBOV1Q9GZY1 135 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 PLGRKTQ9HBL7 147 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 SMURF1Q9HCE7 757 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 NOX4Q9NPH5 578 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 AKIP1Q9NQ31 210 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 CTSZQ9UBR2 303 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 MIOXQ9UGB7 285 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 ZNF391Q9UJN7 358 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 FOXJ3Q9UPW0 622 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 DHDHQ9UQ10 334 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 CMYA5Q8N3K9 4069 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 NOTCH1P46531 2555 aa8.79□□□□□ -1
SHMT2-215ENST00000554656 A0A0G2JK05 382 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 KIR2DS1A0A191URI9 304 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 LOC107986453A0A1B0GWG9 222 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 M0R135 149 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 PIN1P1O15428 100 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 IGLV3-1P01715 115 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 TTRP02766 147 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 CLEC2LP0C7M8 214 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 OMGP23515 440 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 CD40LGP29965 261 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 CD200P41217 278 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 CX3CR1P49238 355 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 BMXP51813 675 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 TPTEP56180 551 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 SCAND1P57086 179 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 FGF12P61328 243 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 PPP3R1P63098 170 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 IL13RA1P78552 427 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 ZNF45Q02386 682 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 DCTN2Q13561 401 aaKnown RBP8.78□□□□□ -1
SHMT2-215ENST00000554656 DEFB112Q30KQ8 113 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms