RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 TEAD3Q99594 435 aa19.48■□□□□ 0.71
FOXA1-204ENST00000554607 HES4Q9HCC6 221 aa19.48■□□□□ 0.71
FOXA1-204ENST00000554607 ARL8BQ9NVJ2 186 aa19.48■□□□□ 0.71
FOXA1-204ENST00000554607 PF4V1P10720 104 aa19.47■□□□□ 0.71
FOXA1-204ENST00000554607 AZGP1P25311 298 aaKnown RBP19.47■□□□□ 0.71
FOXA1-204ENST00000554607 DYNC1I2Q13409 638 aaKnown RBP19.47■□□□□ 0.71
FOXA1-204ENST00000554607 ZNF829Q3KNS6 432 aaPredicted RBP19.47■□□□□ 0.71
FOXA1-204ENST00000554607 CLVS2Q5SYC1 327 aa19.47■□□□□ 0.71
FOXA1-204ENST00000554607 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.47■□□□□ 0.71
FOXA1-204ENST00000554607 A0A1W2PRX2 142 aa19.46■□□□□ 0.71
FOXA1-204ENST00000554607 IGHV1-8P0DP01 117 aa19.46■□□□□ 0.71
FOXA1-204ENST00000554607 MNAT1P51948 309 aa19.46■□□□□ 0.71
FOXA1-204ENST00000554607 HCCSP53701 268 aa19.46■□□□□ 0.71
FOXA1-204ENST00000554607 MINOS1Q5TGZ0 78 aa19.46■□□□□ 0.71
FOXA1-204ENST00000554607 Q6ZS46 218 aa19.46■□□□□ 0.71
FOXA1-204ENST00000554607 ZNF679Q8IYX0 411 aa19.46■□□□□ 0.71
FOXA1-204ENST00000554607 OCSTAMPQ9BR26 566 aa19.46■□□□□ 0.71
FOXA1-204ENST00000554607 TEX12Q9BXU0 123 aa19.46■□□□□ 0.71
FOXA1-204ENST00000554607 NUFIP1Q9UHK0 495 aaKnown RBP19.46■□□□□ 0.71
FOXA1-204ENST00000554607 SLC22A13Q9Y226 551 aa19.46■□□□□ 0.71
FOXA1-204ENST00000554607 MINOS1-NBL1R4GNA1 71 aa19.46■□□□□ 0.71
FOXA1-204ENST00000554607 K7EIL1 84 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 PSMD9O00233 223 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 DLGAP1O14490 977 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 CHRM2P08172 466 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 SLC2A5P22732 501 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 MPZP25189 248 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 SLC35A2P78381 396 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 ROM1Q03395 351 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 LDLRAD2Q5SZI1 272 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 TMEM42Q69YG0 159 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 GDPD3Q7L5L3 318 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 ARHGAP24Q8N264 748 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 ASCC1Q8N9N2 400 aaKnown RBP19.45■□□□□ 0.7
FOXA1-204ENST00000554607 ASB17Q8WXJ9 295 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.45■□□□□ 0.7
FOXA1-204ENST00000554607 TMEM14AQ9Y6G1 99 aa19.45■□□□□ 0.7
FOXA1-204ENST00000554607 PQLC2LA1A4F0 135 aa19.44■□□□□ 0.7
FOXA1-204ENST00000554607 DUS4LO95620 317 aaKnown RBP19.44■□□□□ 0.7
FOXA1-204ENST00000554607 PF4P02776 101 aa19.44■□□□□ 0.7
FOXA1-204ENST00000554607 RIDAP52758 137 aaKnown RBP19.44■□□□□ 0.7
FOXA1-204ENST00000554607 EDDM3BP56851 147 aa19.44■□□□□ 0.7
FOXA1-204ENST00000554607 CDK5Q00535 292 aa19.44■□□□□ 0.7
FOXA1-204ENST00000554607 COL10A1Q03692 680 aa19.44■□□□□ 0.7
FOXA1-204ENST00000554607 SLC34A1Q06495 639 aa19.44■□□□□ 0.7
FOXA1-204ENST00000554607 ASRGL1Q7L266 308 aa19.44■□□□□ 0.7
FOXA1-204ENST00000554607 CENPVQ7Z7K6 275 aaPredicted RBP19.44■□□□□ 0.7
FOXA1-204ENST00000554607 BBS1Q8NFJ9 593 aa19.44■□□□□ 0.7
FOXA1-204ENST00000554607 RCC1LQ96I51 464 aaKnown RBP19.44■□□□□ 0.7
FOXA1-204ENST00000554607 ZNF556Q9HAH1 456 aa19.44■□□□□ 0.7
FOXA1-204ENST00000554607 GPR173Q9NS66 373 aa19.44■□□□□ 0.7
FOXA1-204ENST00000554607 HILPDAQ9Y5L2 63 aa19.44■□□□□ 0.7
FOXA1-204ENST00000554607 CST1P01037 141 aa19.43■□□□□ 0.7
FOXA1-204ENST00000554607 RAP2AP10114 183 aa19.43■□□□□ 0.7
FOXA1-204ENST00000554607 OSMP13725 252 aa19.43■□□□□ 0.7
FOXA1-204ENST00000554607 ERVK11-1P61568 191 aa19.43■□□□□ 0.7
FOXA1-204ENST00000554607 ESRRGP62508 458 aa19.43■□□□□ 0.7
FOXA1-204ENST00000554607 MEF2CQ06413 473 aaPredicted RBP19.43■□□□□ 0.7
FOXA1-204ENST00000554607 APOFQ13790 326 aa19.43■□□□□ 0.7
FOXA1-204ENST00000554607 TRIM25Q14258 630 aaKnown RBP19.43■□□□□ 0.7
FOXA1-204ENST00000554607 TMEM95Q3KNT9 176 aa19.43■□□□□ 0.7
FOXA1-204ENST00000554607 DEFB121Q5J5C9 76 aa19.43■□□□□ 0.7
FOXA1-204ENST00000554607 C16orf82Q7Z2V1 217 aa19.43■□□□□ 0.7
FOXA1-204ENST00000554607 ZNF714Q96N38 554 aa19.43■□□□□ 0.7
FOXA1-204ENST00000554607 PKIBQ9C010 78 aa19.43■□□□□ 0.7
FOXA1-204ENST00000554607 TSSC4Q9Y5U2 329 aaPredicted RBP19.43■□□□□ 0.7
FOXA1-204ENST00000554607 TCRBV4S1A1TA0A5B7 111 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 FAM90A22PA8MWA6 464 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 E2F6O75461 281 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 TTRP02766 147 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 ACTA2P62736 377 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 ACTG2P63267 376 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 ACTC1P68032 377 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 ACTA1P68133 377 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 IL24Q13007 206 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 ZBTB49Q6ZSB9 765 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 BATF2Q8N1L9 274 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 NDNFQ8TB73 568 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 AKR1E2Q96JD6 320 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 MOB1AQ9H8S9 216 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 DNAJB9Q9UBS3 223 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 IKZF2Q9UKS7 526 aa19.42■□□□□ 0.7
FOXA1-204ENST00000554607 hADV38S2A0JD32 116 aa19.41■□□□□ 0.7
FOXA1-204ENST00000554607 ZNF737O75373 536 aa19.41■□□□□ 0.7
FOXA1-204ENST00000554607 DNAJC8O75937 253 aaPredicted RBP19.41■□□□□ 0.7
FOXA1-204ENST00000554607 ACTR3P61158 418 aa19.41■□□□□ 0.7
FOXA1-204ENST00000554607 IL18R1Q13478 541 aa19.41■□□□□ 0.7
FOXA1-204ENST00000554607 OR8H2Q8N162 312 aa19.41■□□□□ 0.7
FOXA1-204ENST00000554607 CAPSLQ8WWF8 208 aa19.41■□□□□ 0.7
FOXA1-204ENST00000554607 CHID1Q9BWS9 393 aa19.41■□□□□ 0.7
FOXA1-204ENST00000554607 V9GYS6 101 aa19.41■□□□□ 0.7
FOXA1-204ENST00000554607 COL7A1Q02388 2944 aa19.4■□□□□ 0.7
FOXA1-204ENST00000554607 DHRS7CA6NNS2 312 aa19.4■□□□□ 0.7
FOXA1-204ENST00000554607 LOC110117498-PIK3R3F6TDL0 507 aa19.4■□□□□ 0.7
FOXA1-204ENST00000554607 GNGT2O14610 69 aa19.4■□□□□ 0.7
FOXA1-204ENST00000554607 DCTN3O75935 186 aa19.4■□□□□ 0.7
FOXA1-204ENST00000554607 CLIC3O95833 236 aa19.4■□□□□ 0.7
FOXA1-204ENST00000554607 MRPL3P09001 348 aaKnown RBP19.4■□□□□ 0.7
FOXA1-204ENST00000554607 MFGE8Q08431 387 aaPredicted RBP19.4■□□□□ 0.7
FOXA1-204ENST00000554607 CCDC121Q6ZUS5 278 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms