RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 SYNGR3O43761 229 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 SYNGR4O95473 234 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 HLA-HP01893 362 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 S100A8P05109 93 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 NOVA1P51513 510 aaKnown RBP10.17□□□□□ -0.78
SHMT2-212ENST00000554467 ARF1P84077 181 aaKnown RBP10.17□□□□□ -0.78
SHMT2-212ENST00000554467 SLC10A1Q14973 349 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 STEAP1BQ6NZ63 245 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 UQCC3Q6UW78 93 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 ETV3LQ6ZN32 361 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 SELENOIQ9C0D9 397 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 POFUT1Q9H488 388 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 PLEKHA6Q9Y2H5 1048 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 CARHSP1Q9Y2V2 147 aaKnown RBP10.17□□□□□ -0.78
SHMT2-212ENST00000554467 MRPS18CQ9Y3D5 142 aaKnown RBP10.17□□□□□ -0.78
SHMT2-212ENST00000554467 RFPL4AA6NLU0 287 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 RFPL4AL1F8VTS6 287 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 GPR37O15354 613 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 RAB3DO95716 219 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 UBBP0CG47 229 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 RPS27AP62979 156 aaKnown RBP10.17□□□□□ -0.78
SHMT2-212ENST00000554467 UBA52P62987 128 aaKnown RBP10.17□□□□□ -0.78
SHMT2-212ENST00000554467 BLOC1S1P78537 153 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 TSC22D1Q15714 1073 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 DEFB109BQ30KR1 87 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 PLEKHN1Q494U1 663 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-212ENST00000554467 OR52W1Q6IF63 320 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 NUFIP2Q7Z417 695 aaKnown RBP10.17□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF546Q86UE3 836 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 OR1F12Q8NHA8 337 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 CPT1CQ8TCG5 803 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 SPTSSAQ969W0 71 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 IP6K3Q96PC2 410 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 SLCO5A1Q9H2Y9 848 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 SPRR3Q9UBC9 169 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF629Q9UEG4 869 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-212ENST00000554467 MED12LQ86YW9 2145 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 SPTBN4Q9H254 2564 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF503-AS2A6NEH8 195 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 KCNAB3O43448 404 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 CLN5O75503 358 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 CRTAPO75718 401 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-212ENST00000554467 HEXAP06865 529 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 AKAIN1P0CW23 69 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 CFPP27918 469 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 HIST1H3AP68431 136 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 OR2B11Q5JQS5 317 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 HIST2H3PS2Q5TEC6 136 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 HIST2H3AQ71DI3 136 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 RHOUQ7L0Q8 258 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 BATF2Q8N1L9 274 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 OR4A4PQ8NGN8 299 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 WNT5BQ9H1J7 359 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 SLC17A5Q9NRA2 495 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 ASF1BQ9NVP2 202 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 KLK13Q9UKR3 277 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 NOP16Q9Y3C1 178 aaKnown RBP10.17□□□□□ -0.78
SHMT2-212ENST00000554467 A0A0A6YYD4 124 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 PRR33A8MZF0 331 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 RAB27BO00194 218 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 VAMP1P23763 118 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 CDNFQ49AH0 187 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 CDPF1Q6NVV7 123 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF529Q6P280 563 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 CPEB3Q8NE35 698 aaKnown RBP10.16□□□□□ -0.78
SHMT2-212ENST00000554467 OR2H1Q9GZK4 316 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 RNF122Q9H9V4 155 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 MCTS1Q9ULC4 181 aaKnown RBP10.16□□□□□ -0.78
SHMT2-212ENST00000554467 ZZEF1O43149 2961 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 A0A1B0GV90 55 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 SOCS1O15524 211 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 TXNL1O43396 289 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 CYB5AP00167 134 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 S100A9P06702 114 aaKnown RBP10.16□□□□□ -0.78
SHMT2-212ENST00000554467 FCGR2AP12318 317 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 PPT1P50897 306 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 SCAND1P57086 179 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 QRFPP83859 136 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 FABP9Q0Z7S8 132 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 RAB35Q15286 201 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 EIF2S3LQ2VIR3 472 aaKnown RBP10.16□□□□□ -0.78
SHMT2-212ENST00000554467 REEP6Q96HR9 211 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 PTPRBP23467 1997 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 TNRC6AQ8NDV7 1962 aaKnown RBP10.16□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF729A6NN14 1252 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-212ENST00000554467 TMEM127O75204 238 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 DHRS3O75911 302 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 CST2P09228 141 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 CSF1P09603 554 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 FOLR2P14207 255 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 CRYGSP22914 178 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 OTX1P32242 354 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-212ENST00000554467 SOX8P57073 446 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 MRPS10P82664 201 aaKnown RBP10.16□□□□□ -0.78
SHMT2-212ENST00000554467 KISS1Q15726 138 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 KCTD9Q7L273 389 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 FAM219AQ8IW50 185 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 SPAG16Q8N0X2 631 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 GPX8Q8TED1 209 aa10.16□□□□□ -0.78
SHMT2-212ENST00000554467 FOXRED1Q96CU9 486 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms