RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 POLR2IP36954 125 aaKnown RBP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 NSG1P42857 185 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 KIR2DL2P43627 348 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 EVX1P49640 407 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 KLF3P57682 345 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF121P58317 390 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 BTN3A2P78410 334 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 IL13RA1P78552 427 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 DLK1P80370 383 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 CAV1Q03135 178 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 GTF2H2Q13888 395 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 FAM53BQ14153 422 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 SRSF7Q16629 238 aaKnown RBP eCLIP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 HSD17B12Q53GQ0 312 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 EIPR1Q53HC9 387 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 EMC4Q5J8M3 183 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 TMEM236Q5W0B7 351 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 FAM90A2PQ658T7 463 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 TMEM42Q69YG0 159 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 NANOGP8Q6NSW7 305 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 MFSD12Q6NUT3 480 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 GTF2H2CQ6P1K8 395 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF529Q6P280 563 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 TFAP2EQ6VUC0 442 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 Q6ZSR9 355 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 LAS2Q8IYD9 372 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 MTURNQ8N3F0 131 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 C9orf62Q8N4C0 152 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF611Q8N823 705 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 ADAD2Q8NCV1 583 aaKnown RBP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 OR2M7Q8NG81 312 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 OR4E2Q8NGC2 313 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 OR5L2Q8NGL0 311 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 OR8U1Q8NH10 309 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 RNF141Q8WVD5 230 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 GHSRQ92847 366 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 SNAPC3Q92966 411 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 PYCR2Q96C36 320 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 C8orf44Q96CB5 159 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 RAB39BQ96DA2 213 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 FCRL1Q96LA6 429 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 NOL4LQ96MY1 436 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 FYTTD1Q96QD9 318 aaKnown RBP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 ATP5SQ99766 215 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 SYT4Q9H2B2 425 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 BPIFA1Q9NP55 256 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 ENY2Q9NPA8 101 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 SLC52A3Q9NQ40 469 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 DNAJB12Q9NXW2 375 aaKnown RBP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 OR1A1Q9P1Q5 309 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 RSL24D1Q9UHA3 163 aaKnown RBP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF107Q9UII5 783 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 ADAM29Q9UKF5 820 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 FBXO5Q9UKT4 447 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 OAZ3Q9UMX2 235 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 COA3Q9Y2R0 106 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 NSG2Q9Y328 171 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 TMED3Q9Y3Q3 217 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 SCN2AQ99250 2005 aa2.34□□□□□ -2.03
PRPF39-206ENST00000554429 RAI1Q7Z5J4 1906 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-206ENST00000554429 OTOGQ6ZRI0 2925 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 FBN2P35556 2912 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 MDC1Q14676 2089 aaKnown RBP2.34□□□□□ -2.04
PRPF39-206ENST00000554429 CENPVL1A0A0U1RR11 272 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 CENPVL3A0A0U1RRI6 287 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 LOC100289279A0A1B0GTE1 492 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 A0A1B0GTL3 188 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 TINCRA0A1B0GVN0 87 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 A0A1B0GW55 424 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 GXYLT2A0PJZ3 443 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 C20orf202A1L168 122 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 OR5H15A6NDH6 313 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 OR5H14A6NHG9 310 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 HSPB2A8KAH6 182 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 RNF212BA8MTL3 300 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF878C9JN71 531 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 SLC1A7O00341 560 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 EI24O14681 340 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 RGS14O43566 566 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 ATG12O94817 140 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 CBX7O95931 251 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 CSN3P07498 182 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 SNRPCP09234 159 aaKnown RBP2.34□□□□□ -2.04
PRPF39-206ENST00000554429 METTL15P1P0C7V9 234 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 DUX4L2P0CJ85 424 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 DUX4L3P0CJ86 424 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 DUX4L5P0CJ88 424 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 DUX4L6P0CJ89 424 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 DUX4L7P0CJ90 424 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 ADORA3P0DMS8 318 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 HIST1H1EP10412 219 aaKnown RBP2.34□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF35P13682 527 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF23P17027 643 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 CFPP27918 469 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 RPS19P39019 145 aaKnown RBP2.34□□□□□ -2.04
PRPF39-206ENST00000554429 CDKN2DP55273 166 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 ABCE1P61221 599 aaKnown RBP2.34□□□□□ -2.04
PRPF39-206ENST00000554429 RAP2BP61225 183 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 PAFAH1B2P68402 229 aa2.34□□□□□ -2.04
PRPF39-206ENST00000554429 PSG5Q15238 335 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms