RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 CRTAPO75718 401 aaPredicted RBP14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 HCKP08631 526 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 DHPSP49366 369 aaPredicted RBP14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 CSNK2A1P68400 391 aaPredicted RBP14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 CSNK2A3Q8NEV1 391 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 FAM213BQ8TBF2 198 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 MRPL24Q96A35 216 aaKnown RBP14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 ZNF581Q9P0T4 197 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 COL4A2P08572 1712 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 ZNF724A8MTY0 619 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 ALG1L2C9J202 215 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 TCAPO15273 167 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 CYB5BO43169 146 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 NPIPB7O75200 414 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 SFTPDP35247 375 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 P2RY1P47900 373 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 SUCLG1P53597 346 aaKnown RBP14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 GGNBP1Q5YKI7 109 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 OR2T2Q6IF00 324 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 RHBDD1Q8TEB9 315 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 NEU1Q99519 415 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 SRPK3Q9UPE1 567 aa14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 C14orf166Q9Y224 244 aaKnown RBP14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 STRAPQ9Y3F4 350 aaKnown RBP14.86□□□□□ -0.03
PPP4R3A-202ENST00000554390 APOBEC1P41238 236 aaKnown RBP14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 CASP6P55212 293 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 SNU13P55769 128 aaKnown RBP14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 UBE2KP61086 200 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 FOXF1Q12946 379 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 USF2Q15853 346 aaPredicted RBP14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 DNLZQ5SXM8 178 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 OR10AD1Q8NGE0 317 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 OR5D14Q8NGL3 314 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 HDHD3Q9BSH5 251 aaPredicted RBP14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 FBLN5Q9UBX5 448 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 MRPS28Q9Y2Q9 187 aaKnown RBP14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 ELOA3CA0A087WX78 387 aaPredicted RBP14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 ZNF814B7Z6K7 855 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 ZNHIT1O43257 154 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 BRICD5Q6PL45 260 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 PLXDC2Q6UX71 529 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 TMEM182Q6ZP80 229 aaPredicted RBP14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 LRRC18Q8N456 261 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 COPS7AQ9UBW8 275 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 HS3ST3A1Q9Y663 406 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 CDC14BO60729 498 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 PTBP3O95758 552 aaKnown RBP14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 IFNA21P01568 189 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 CD81P60033 236 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 HSF1Q00613 529 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 HIST2H3PS2Q5TEC6 136 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 KIAA0895LQ68EN5 471 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 NUP54Q7Z3B4 507 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 TMEM68Q96MH6 324 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 FAM206AQ9NX38 181 aa14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 RCL1Q9Y2P8 373 aaKnown RBP14.85□□□□□ -0.03
PPP4R3A-202ENST00000554390 H0YL77 283 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 EFNA2O43921 213 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 CCL20P78556 96 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 HAGHQ16775 308 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 HIKESHIQ53FT3 197 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 APCDD1LQ8NCL9 501 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 LFNGQ8NES3 379 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 ASB10Q8WXI3 467 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 TMEM59Q9BXS4 323 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 GPR84Q9NQS5 396 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 XRCC2O43543 280 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 MBPP02686 304 aaPredicted RBP14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 TRGC1P0CF51 173 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 ZNF20P17024 532 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 SLC6A8P48029 635 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 AFF3P51826 1226 aaKnown RBP14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 DLK1P80370 383 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 CFHR1Q03591 330 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 LBHQ53QV2 105 aaPredicted RBP14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 KLHL24Q6TFL4 600 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 FAM57BQ71RH2 274 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 GRINAQ7Z429 371 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 OR14K1Q8NGZ2 314 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 CA5BP1Q8WTZ4 195 aa14.84□□□□□ -0.03
PPP4R3A-202ENST00000554390 IGKV1D-8A0A087WSZ0 117 aa14.83□□□□□ -0.03
PPP4R3A-202ENST00000554390 E5RGE8 158 aa14.83□□□□□ -0.03
PPP4R3A-202ENST00000554390 FTCDNL1E5RQL4 147 aa14.83□□□□□ -0.03
PPP4R3A-202ENST00000554390 ACY1Q03154 408 aa14.83□□□□□ -0.03
PPP4R3A-202ENST00000554390 ABHD5Q8WTS1 349 aa14.83□□□□□ -0.03
PPP4R3A-202ENST00000554390 HPSE2Q8WWQ2 592 aa14.83□□□□□ -0.03
PPP4R3A-202ENST00000554390 PACRGQ96M98 296 aaPredicted RBP14.83□□□□□ -0.03
PPP4R3A-202ENST00000554390 C1orf147Q96MC9 270 aaPredicted RBP14.83□□□□□ -0.03
PPP4R3A-202ENST00000554390 C8orf33Q9H7E9 229 aaPredicted RBP14.83□□□□□ -0.03
PPP4R3A-202ENST00000554390 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.83□□□□□ -0.03
PPP4R3A-202ENST00000554390 ZNF701Q9NV72 531 aaPredicted RBP14.83□□□□□ -0.03
PPP4R3A-202ENST00000554390 NSG2Q9Y328 171 aa14.83□□□□□ -0.03
PPP4R3A-202ENST00000554390 A0A1B0GW64 132 aa14.83□□□□□ -0.04
PPP4R3A-202ENST00000554390 QDPRP09417 244 aa14.83□□□□□ -0.04
PPP4R3A-202ENST00000554390 IL2RGP31785 369 aa14.83□□□□□ -0.04
PPP4R3A-202ENST00000554390 ASCL1P50553 236 aa14.83□□□□□ -0.04
PPP4R3A-202ENST00000554390 MMP16P51512 607 aa14.83□□□□□ -0.04
PPP4R3A-202ENST00000554390 ZNF385CQ66K41 422 aaPredicted RBP14.83□□□□□ -0.04
PPP4R3A-202ENST00000554390 KCNG3Q8TAE7 436 aa14.83□□□□□ -0.04
PPP4R3A-202ENST00000554390 CRLF2Q9HC73 371 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms