RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 Q96M66 194 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 HS3ST6Q96QI5 342 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 TM2D1Q9BX74 207 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 MS4A5Q9H3V2 200 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 ELL3Q9HB65 397 aaPredicted RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 CISD1Q9NZ45 108 aaKnown RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 IL19Q9UHD0 177 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 ING4Q9UNL4 249 aa6.5□□□□□ -1.37
TDP1-209ENST00000554180 HELZ2Q9BYK8 2649 aaKnown RBP6.5□□□□□ -1.37
TDP1-209ENST00000554180 IGKV1-12A0A0C4DH73 117 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 A6NNC1 897 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 C17orf100A8MU93 164 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 F5H5P2 479 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 H0YL77 283 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 J3QKU1 62 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 RAB27BO00194 218 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 HS3ST1O14792 307 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 CTDSPLO15194 276 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 ANGPTL7O43827 346 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 MPIG6BO95866 241 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 PLAUP00749 431 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 PLATP00750 562 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 IGKV1D-12P01611 117 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 IGHV1-46P01743 117 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 RNF224P0DH78 156 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 PGA5P0DJD9 388 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 PLA2G2AP14555 144 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 TNFRSF1AP19438 455 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 SERPINA2P20848 420 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 CDK2P24941 298 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 FGF12P61328 243 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 ERVK11-1P61568 191 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 SNRPD2P62316 118 aaKnown RBP6.49□□□□□ -1.37
TDP1-209ENST00000554180 DCTN2Q13561 401 aaKnown RBP6.49□□□□□ -1.37
TDP1-209ENST00000554180 ARL6IP1Q15041 203 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 TESK1Q15569 626 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 ZNF79Q15937 498 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 SWI5Q1ZZU3 235 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 OR10K2Q6IF99 312 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 LINC00596Q86U02 117 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 FBXL14Q8N1E6 418 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 OSR2Q8N2R0 312 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 MUC15Q8N387 334 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 FAM89BQ8N5H3 189 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 SCCPDHQ8NBX0 429 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 TMEM104Q8NE00 496 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 OR51T1Q8NGJ9 327 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 OR10Z1Q8NGY1 313 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 Q8TCH9 128 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 MEGF10Q96KG7 1140 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 NRIP2Q9BQI9 281 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 SRRQ9GZT4 340 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 LPAR5Q9H1C0 372 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 ATG5Q9H1Y0 275 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 KCNK15Q9H427 330 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 CXorf56Q9H5V9 222 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 FN3KRPQ9HA64 309 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 DYNLRB1Q9NP97 96 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 MTCH1Q9NZJ7 389 aa6.49□□□□□ -1.37
TDP1-209ENST00000554180 USP9YO00507 2555 aaPredicted RBP6.49□□□□□ -1.37
TDP1-209ENST00000554180 A0A0G2JMP0 313 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 A0A0X1KG70 313 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 FAM221AA4D161 298 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 A6NLC8 198 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 FOXI3A8MTJ6 420 aaPredicted RBP6.48□□□□□ -1.37
TDP1-209ENST00000554180 IFNL4K9M1U5 179 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 CDIPTO14735 213 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 GSTZ1O43708 216 aaPredicted RBP6.48□□□□□ -1.37
TDP1-209ENST00000554180 SYNGR1O43759 233 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 HTR3BO95264 441 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 SFTPBP07988 381 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 PTH2RP49190 550 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 PPOXP50336 477 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 RBM11P57052 281 aaKnown RBP6.48□□□□□ -1.37
TDP1-209ENST00000554180 TAS2R20P59543 309 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 TNFAIP6P98066 277 aaPredicted RBP6.48□□□□□ -1.37
TDP1-209ENST00000554180 SRSF1Q07955 248 aaKnown RBP eCLIP6.48□□□□□ -1.37
TDP1-209ENST00000554180 PLA2G7Q13093 441 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 IL13RA2Q14627 380 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 MST1LQ2TV78 715 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 SPIN3Q5JUX0 258 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 AGAP6Q5VW22 663 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 FIP1L1Q6UN15 594 aaKnown RBP6.48□□□□□ -1.37
TDP1-209ENST00000554180 WDR82Q6UXN9 313 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 BIVMQ86UB2 503 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 DTX2Q86UW9 622 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 FAM90A1Q86YD7 464 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 C11orf53Q8IXP5 236 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 Q8N402 240 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 POC1AQ8NBT0 407 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 OR4M2Q8NGB6 313 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 OR10K1Q8NGX5 313 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 OR10R2Q8NGX6 335 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 SMIM4Q8WVI0 70 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 GTF3AQ92664 365 aaKnown RBP6.48□□□□□ -1.37
TDP1-209ENST00000554180 NEUROG1Q92886 237 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 HPS1Q92902 700 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 SLAMF9Q96A28 289 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 OR2V2Q96R30 315 aa6.48□□□□□ -1.37
TDP1-209ENST00000554180 GAL3ST1Q99999 423 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms