RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 GCM1Q9NP62 436 aa12.27□□□□□ -0.45
SHMT2-210ENST00000553950 C1orf123Q9NWV4 160 aa12.27□□□□□ -0.45
SHMT2-210ENST00000553950 RNF7Q9UBF6 113 aa12.27□□□□□ -0.45
SHMT2-210ENST00000553950 RABL2AQ9UBK7 228 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-210ENST00000553950 RAB22AQ9UL26 194 aa12.27□□□□□ -0.45
SHMT2-210ENST00000553950 ING4Q9UNL4 249 aa12.27□□□□□ -0.45
SHMT2-210ENST00000553950 RABL2BQ9UNT1 228 aa12.27□□□□□ -0.45
SHMT2-210ENST00000553950 IGHV1-69-2A0A0G2JMI3 117 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A10PA6NDY2 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A18PA6NE21 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A16PA6NEW6 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A20PA6NIJ5 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A8PA6NJQ4 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A7PA6NKC0 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A22PA8MWA6 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 TMEM14DPA8MWL7 114 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A12PA8MX19 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A5PA8MXJ8 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A23PA8MXZ1 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 SRRM5B3KS81 715 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 RGS5O15539 181 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 CRTAPO75718 401 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-210ENST00000553950 NXPH2O95156 264 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 APOA1P02647 267 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A15PP0C7V4 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A13PP0C7W8 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A14PP0C7W9 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FAM90A24PP0C7X0 464 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 VSIG8P0DPA2 414 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 SNRPBP14678 240 aaKnown RBP12.26□□□□□ -0.45
SHMT2-210ENST00000553950 SERPINA2P20848 420 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 ART1P52961 327 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 CLDN12P56749 244 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 FGF12P61328 243 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 KCNJ8Q15842 424 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 HFEQ30201 348 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 SPIN3Q5JUX0 258 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 ZNF787Q6DD87 383 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 RAB12Q6IQ22 244 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 CRIP3Q6Q6R5 217 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 OSR2Q8N2R0 312 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 SAMD12Q8N8I0 201 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 LRRC29Q8WV35 223 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 EMG1Q92979 244 aaKnown RBP12.26□□□□□ -0.45
SHMT2-210ENST00000553950 SLAMF9Q96A28 289 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 NRIP2Q9BQI9 281 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 UFSP2Q9NUQ7 469 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 RHBDL2Q9NX52 303 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 OR5V1Q9UGF6 321 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 GLS2Q9UI32 602 aa12.26□□□□□ -0.45
SHMT2-210ENST00000553950 PTPN13Q12923 2485 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 OVOL3O00110 214 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 AKR7A2O43488 359 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 SYNGR1O43759 233 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 ANGPTL7O43827 346 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 CDC14BO60729 498 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 HTR3BO95264 441 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 CSF3P09919 207 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 MGMTP16455 207 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 GLRA1P23415 457 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 EFNA4P52798 201 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 IL13RA2Q14627 380 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 ARL6IP1Q15041 203 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 MPPED2Q15777 294 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 MPV17LQ2QL34 196 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 C2orf76Q3KRA6 126 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 BAIAP2L2Q6UXY1 529 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 PEG10Q86TG7 708 aaKnown RBP12.25□□□□□ -0.45
SHMT2-210ENST00000553950 Q8NFD4 153 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 RDH5Q92781 318 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 FAM46BQ96A09 425 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 C1orf147Q96MC9 270 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-210ENST00000553950 WDFY2Q96P53 400 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 NUDT16L1Q9BRJ7 211 aaKnown RBP12.25□□□□□ -0.45
SHMT2-210ENST00000553950 COMMD3Q9UBI1 195 aa12.25□□□□□ -0.45
SHMT2-210ENST00000553950 TMEM272A0A1B0GTI8 110 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 CLDN25C9JDP6 229 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 LDLRAD4O15165 306 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 FSTL3O95633 263 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 MPIG6BO95866 241 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 KNG1P01042 644 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 BCL3P20749 454 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 COL8A1P27658 744 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 RBM11P57052 281 aaKnown RBP12.24□□□□□ -0.45
SHMT2-210ENST00000553950 ERVK11-1P61568 191 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 QRFPP83859 136 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 TENM4Q6N022 2769 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 FAM58AQ8N1B3 248 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 OR56B1Q8NGI3 324 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 OR51T1Q8NGJ9 327 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 C15orf40Q8WUR7 153 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 IGFBPL1Q8WX77 278 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 TIMD4Q96H15 378 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 TM2D1Q9BX74 207 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 ABCG5Q9H222 651 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 SPACA1Q9HBV2 294 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 HES4Q9HCC6 221 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 TMEM106BQ9NUM4 274 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 MTCH1Q9NZJ7 389 aa12.24□□□□□ -0.45
SHMT2-210ENST00000553950 DNAJB11Q9UBS4 358 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms