RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.55□□□□□ -1.84
RDH11-204ENST00000553578 ZNF318Q5VUA4 2279 aa3.55□□□□□ -1.84
RDH11-204ENST00000553578 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 HMSDA8MTL9 139 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 SNAI2O43623 268 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 LANCL1O43813 399 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 SC5DO75845 299 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 CDS2O95674 445 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TRGC2P03986 189 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 CTSLP07711 333 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 CLDN18P56856 261 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 SPHARQ15513 63 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 PSG3Q16557 428 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 CCSMST1Q4G0I0 132 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 OLFML2AQ68BL7 652 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 CAPN13Q6MZZ7 669 aaPredicted RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 REEP3Q6NUK4 255 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 DUX4L9Q6RFH8 374 aaPredicted RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 TMEM91Q6ZNR0 172 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 Q6ZPB1 254 aaPredicted RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 Q6ZVH6 145 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 GTF2H5Q6ZYL4 71 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 C6orf120Q7Z4R8 191 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 PLPP5Q8NEB5 264 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 OR2Z1Q8NG97 314 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 OR4K2Q8NGD2 314 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 OR52L2PQ8NGH6 319 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 OR1J1Q8NGS3 322 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 GHSRQ92847 366 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 GALNT14Q96FL9 552 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 OR6C1Q96RD1 312 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 CHRNA10Q9GZZ6 450 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 SLC25A31Q9H0C2 315 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 ATG5Q9H1Y0 275 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 KCNJ16Q9NPI9 418 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 MMP26Q9NRE1 261 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 PHPT1Q9NRX4 125 aaPredicted RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 IKZF2Q9UKS7 526 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 SHISA7A6NL88 538 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 C1QTNF3-AMACRE9PGA6 284 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 M0R129 80 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 IFNA5P01569 189 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 HLA-DQB1P01920 261 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 UMODP07911 640 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 PSG1P11464 419 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 AGTR1P30556 359 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 ART1P52961 327 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 HMGN3Q15651 99 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 INO80CQ6PI98 192 aaPredicted RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 TMEM179BQ7Z7N9 219 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 SAMD12Q8N8I0 201 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 INO80EQ8NBZ0 244 aaPredicted RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 OR2T12Q8NG77 320 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 OR9Q2Q8NGE9 314 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 LOXL4Q96JB6 756 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 LRRC3BQ96PB8 259 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 PBDC1Q9BVG4 233 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 SYT4Q9H2B2 425 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 REEP1Q9H902 201 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 ONECUT1Q9UBC0 465 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 GALPQ9UBC7 116 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 ZNF107Q9UII5 783 aaPredicted RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 TMEM131Q92545 1883 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 LAMA2P24043 3122 aaKnown RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 LOC102723996A0A087X1L8 192 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TMEM269A0A1B0GVZ9 245 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TMEM89A2RUT3 159 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 ARRDC5A6NEK1 342 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 PRSS29PA6NIE9 313 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 NPIPB11E5RHQ5 1161 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 HSD17B6O14756 317 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TNFSF12O43508 249 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 CTSVO60911 334 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 SCELO95171 688 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TSFMP43897 325 aaKnown RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 SOX2P48431 317 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 UBE2MP61081 183 aaKnown RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 SSX1Q16384 188 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 UNQ5815/PRO19632Q6UWF5 114 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TOMM20LQ6UXN7 152 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 SLC35D2Q76EJ3 337 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 LYG2Q86SG7 212 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 BEST3Q8N1M1 668 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TMEM163Q8TC26 289 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 SECTM1Q8WVN6 248 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TMED6Q8WW62 240 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 RAB1CQ92928 201 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 PIK3IP1Q96FE7 263 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 ATF6BQ99941 703 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 OR8D2Q9GZM6 311 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 EIF5A2Q9GZV4 153 aaKnown RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 OR2S2Q9NQN1 319 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 CLN6Q9NWW5 311 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 ZNF226Q9NYT6 803 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 CNTRLQ7Z7A1 2325 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 G3V3Q6 166 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TIMM8AO60220 97 aaPredicted RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 SAP30O75446 220 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 UTS2O95399 124 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 BRI3O95415 125 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms