RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 SNTG1Q9NSN8 517 aa15.31■□□□□ 0.04
CPSF2-202ENST00000553427 DHDHQ9UQ10 334 aa15.31■□□□□ 0.04
CPSF2-202ENST00000553427 IGKV1D-17A0A075B6S4 117 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 A0A1B0GW55 424 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 MYL12BO14950 172 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 CDK1P06493 297 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 DUX4L2P0CJ85 424 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 DUX4L3P0CJ86 424 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 DUX4L4P0CJ87 422 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 DUX4L5P0CJ88 424 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 DUX4L6P0CJ89 424 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 DUX4L7P0CJ90 424 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 GMFBP60983 142 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 LRRC10Q5BKY1 277 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 ZNF529Q6P280 563 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 DUX4L9Q6RFH8 374 aaPredicted RBP15.3■□□□□ 0.04
CPSF2-202ENST00000553427 SERPINA12Q8IW75 414 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 OR5D14Q8NGL3 314 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 TSEN15Q8WW01 171 aaKnown RBP15.3■□□□□ 0.04
CPSF2-202ENST00000553427 GATAD2BQ8WXI9 593 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 MYDGFQ969H8 173 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 UPRTQ96BW1 309 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 CDCA4Q9BXL8 241 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 SCN3BQ9NY72 215 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 DUX4Q9UBX2 424 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 METRNQ9UJH8 293 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 ZNF281Q9Y2X9 895 aa15.3■□□□□ 0.04
CPSF2-202ENST00000553427 SIRT4Q9Y6E7 314 aaPredicted RBP15.3■□□□□ 0.04
CPSF2-202ENST00000553427 NDUFB3O43676 98 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 NXPH2O95156 264 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 KNG1P01042 644 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 CD1AP06126 327 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 CD2P06729 351 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 VHLP40337 213 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 MTCP1P56278 107 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 CAV3P56539 151 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 WNT4P56705 351 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 SLC35A2P78381 396 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 BDH1Q02338 343 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 Q8IYB0 196 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 NANOGP1Q8N7R0 232 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 PNLDC1Q8NA58 520 aaKnown RBP15.29■□□□□ 0.04
CPSF2-202ENST00000553427 OR5T2Q8NGG2 359 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 OR13C9Q8NGT0 318 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 ST8SIA4Q92187 359 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 CEP19Q96LK0 163 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 ZNF488Q96MN9 340 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 RPUSD1Q9UJJ7 312 aaKnown RBP15.29■□□□□ 0.04
CPSF2-202ENST00000553427 RAB26Q9ULW5 256 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 ERGIC3Q9Y282 383 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 PCDHGB5Q9Y5G0 923 aa15.29■□□□□ 0.04
CPSF2-202ENST00000553427 SULT1B1O43704 296 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 ADRA2CP18825 462 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 EPHA1P21709 976 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 DGUOKQ16854 277 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 YIF1BQ5BJH7 314 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 ARMCX4Q5H9R4 360 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 SLC25A26Q70HW3 274 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 BTN2A1Q7KYR7 527 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 MKXQ8IYA7 352 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 LY6G5BQ8NDX9 201 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 C8orf46Q8TAG6 207 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 GHSRQ92847 366 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 PGLYRP3Q96LB9 341 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 RASSF4Q9H2L5 321 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 DUSP21Q9H596 190 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 SEBOXQ9HB31 216 aaPredicted RBP15.28■□□□□ 0.04
CPSF2-202ENST00000553427 PAK1IP1Q9NWT1 392 aaPredicted RBP15.28■□□□□ 0.04
CPSF2-202ENST00000553427 MTCH1Q9NZJ7 389 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 TPRKBQ9Y3C4 175 aa15.28■□□□□ 0.04
CPSF2-202ENST00000553427 TRBV5-5A0A0J9YX44 114 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 RFPL4AA6NLU0 287 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 RFPL4AL1F8VTS6 287 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 CYB5AP00167 134 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 OCM2P0CE71 109 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 OCMP0CE72 109 aaPredicted RBP15.27■□□□□ 0.04
CPSF2-202ENST00000553427 SELLP14151 372 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 ACSM1Q08AH1 577 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 PDZK1IP1Q13113 114 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 IKZF1Q13422 519 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 TUSC1Q2TAM9 212 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 ASPHD2Q6ICH7 369 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 CPNE2Q96FN4 548 aaPredicted RBP15.27■□□□□ 0.04
CPSF2-202ENST00000553427 MND1Q9BWT6 205 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 SLC25A10Q9UBX3 287 aaPredicted RBP15.27■□□□□ 0.04
CPSF2-202ENST00000553427 MAB21L2Q9Y586 359 aa15.27■□□□□ 0.04
CPSF2-202ENST00000553427 A0A0A6YYJ9 748 aa15.26■□□□□ 0.03
CPSF2-202ENST00000553427 ZNF879B4DU55 563 aa15.26■□□□□ 0.03
CPSF2-202ENST00000553427 PRDX2P32119 198 aa15.26■□□□□ 0.03
CPSF2-202ENST00000553427 GABRA2P47869 451 aa15.26■□□□□ 0.03
CPSF2-202ENST00000553427 IRF3Q14653 427 aa15.26■□□□□ 0.03
CPSF2-202ENST00000553427 KLF17Q5JT82 389 aaPredicted RBP15.26■□□□□ 0.03
CPSF2-202ENST00000553427 CRIP3Q6Q6R5 217 aa15.26■□□□□ 0.03
CPSF2-202ENST00000553427 SAXO1Q8IYX7 474 aa15.26■□□□□ 0.03
CPSF2-202ENST00000553427 ZNF561Q8N587 486 aa15.26■□□□□ 0.03
CPSF2-202ENST00000553427 CD177Q8N6Q3 437 aa15.26■□□□□ 0.03
CPSF2-202ENST00000553427 KIR3DL3Q8N743 410 aa15.26■□□□□ 0.03
CPSF2-202ENST00000553427 ZSCAN4Q8NAM6 433 aaPredicted RBP15.26■□□□□ 0.03
CPSF2-202ENST00000553427 TMEM106AQ96A25 262 aa15.26■□□□□ 0.03
CPSF2-202ENST00000553427 SLAMF9Q96A28 289 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms