RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 CALHM1Q8IU99 346 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 MKXQ8IYA7 352 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 CCDC54Q8NEL0 328 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 OR4C13Q8NGP0 309 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 OR14K1Q8NGZ2 314 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 ZNF488Q96MN9 340 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 NRIP2Q9BQI9 281 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 CADM1Q9BY67 442 aaKnown RBP10.4□□□□□ -0.74
LINC00643-202ENST00000553426 PKIBQ9C010 78 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 AP4S1Q9Y587 144 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 VWFP04275 2813 aa10.4□□□□□ -0.74
LINC00643-202ENST00000553426 FAM230AA0A1W2PPH8 454 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 A6NIN4 97 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 M0R129 80 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 MAGEB4O15481 346 aaPredicted RBP10.39□□□□□ -0.75
LINC00643-202ENST00000553426 GATBO75879 557 aaKnown RBP10.39□□□□□ -0.75
LINC00643-202ENST00000553426 ATP5HO75947 161 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 TK1P04183 234 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 OR2T7P0C7T2 308 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 MPZP25189 248 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 EPHA2P29317 976 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 EFNB1P98172 346 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 LY6EQ16553 131 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 C1orf146Q5VVC0 180 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 C12orf73Q69YU5 71 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 LIAT1Q6ZQX7 453 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 ASCC1Q8N9N2 400 aaKnown RBP10.39□□□□□ -0.75
LINC00643-202ENST00000553426 OR4M1Q8NGD0 313 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 OR2T6Q8NHC8 308 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 RFKQ969G6 155 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 TBX5Q99593 518 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 GABARAPL1Q9H0R8 117 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 MEGF9Q9H1U4 602 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 MRM2Q9UI43 246 aaKnown RBP10.39□□□□□ -0.75
LINC00643-202ENST00000553426 SLC22A13Q9Y226 551 aa10.39□□□□□ -0.75
LINC00643-202ENST00000553426 WNK1Q9H4A3 2382 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 A0A1B0GTI1 187 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 METTL15A6NJ78 407 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 SULT1C4O75897 302 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 CHRM2P08172 466 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 CSF1P09603 554 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 COX7A1P24310 79 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 HTR1FP30939 366 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 KIR2DS4P43632 304 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 CEBPDP49716 269 aaPredicted RBP10.38□□□□□ -0.75
LINC00643-202ENST00000553426 FUT6P51993 359 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 BNIP1Q12981 228 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 IL24Q13007 206 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 TMED1Q13445 227 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 ODF4Q2M2E3 257 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 HCP5Q6MZN7 132 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 GDPD3Q7L5L3 318 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 FAM220AQ7Z4H9 259 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 OR10H4Q8NGA5 316 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 OR8J1Q8NGP2 316 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 OR13D1Q8NGV5 346 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 TRMT10AQ8TBZ6 339 aaKnown RBP10.38□□□□□ -0.75
LINC00643-202ENST00000553426 RORBQ92753 470 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 NPFFR1Q9GZQ6 430 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 RANBP3Q9H6Z4 567 aaPredicted RBP10.38□□□□□ -0.75
LINC00643-202ENST00000553426 HES4Q9HCC6 221 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 ABCB10Q9NRK6 738 aa10.38□□□□□ -0.75
LINC00643-202ENST00000553426 K7N7A8 449 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 CYB5AP00167 134 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 PIPP12273 146 aaPredicted RBP10.37□□□□□ -0.75
LINC00643-202ENST00000553426 CCL3L1P16619 93 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 CCL1P22362 96 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 EDDM3BP56851 147 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 CDC42P60953 191 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 HERPUD1Q15011 391 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 CNN3Q15417 329 aaKnown RBP10.37□□□□□ -0.75
LINC00643-202ENST00000553426 ZNF782Q6ZMW2 699 aaPredicted RBP10.37□□□□□ -0.75
LINC00643-202ENST00000553426 Q6ZSR3 168 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 AMIGO2Q86SJ2 522 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 CATSPERDQ86XM0 798 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 ANGPTL5Q86XS5 388 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 BATF2Q8N1L9 274 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 FAM110DQ8TAY7 271 aaPredicted RBP10.37□□□□□ -0.75
LINC00643-202ENST00000553426 C17orf50Q8WW18 174 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 C10orf35Q96D05 121 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 BORCS8Q96FH0 119 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 CEP19Q96LK0 163 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 CIB1Q99828 191 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 OSBPL10Q9BXB5 764 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 RIBC2Q9H4K1 309 aa10.37□□□□□ -0.75
LINC00643-202ENST00000553426 NOTCH1P46531 2555 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 A0A1W2PQL4 384 aaPredicted RBP10.36□□□□□ -0.75
LINC00643-202ENST00000553426 H3BSH0 61 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 H3BUI4 141 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 CIB2O75838 187 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 OCM2P0CE71 109 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 OCMP0CE72 109 aaPredicted RBP10.36□□□□□ -0.75
LINC00643-202ENST00000553426 UBCP0CG48 685 aaKnown RBP10.36□□□□□ -0.75
LINC00643-202ENST00000553426 ZNF728P0DKX0 622 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 BMXP51813 675 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 ERVK11-1P61568 191 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 COL10A1Q03692 680 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 ZNF273Q14593 569 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 SSX6Q7RTT6 188 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 EGFL6Q8IUX8 553 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms