RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 HIST2H3AQ71DI3 136 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 SMIM15Q7Z3B0 74 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 ZNF441Q8N8Z8 693 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 SLC38A9Q8NBW4 561 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 CCDC54Q8NEL0 328 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 SLC26A10Q8NG04 563 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 OR56B1Q8NGI3 324 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 EMG1Q92979 244 aaKnown RBP6.47□□□□□ -1.37
BEST3-212ENST00000553096 TMEM230Q96A57 120 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 FGGYQ96C11 551 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 CMBLQ96DG6 245 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 RAB3CQ96E17 227 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 ABHD17AQ96GS6 310 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 FAM71F1Q96KD3 344 aaPredicted RBP6.47□□□□□ -1.37
BEST3-212ENST00000553096 CLCC1Q96S66 551 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 ADOQ96SZ5 270 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 OCSTAMPQ9BR26 566 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 C5orf66Q9H5L9 145 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 FAM86C1Q9NVL1 165 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 SUSD2Q9UGT4 822 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 COA3Q9Y2R0 106 aaPredicted RBP6.47□□□□□ -1.37
BEST3-212ENST00000553096 CACNA1HO95180 2353 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 TMED7-TICAM2A0A0A6YYA0 188 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 NPIPB13A6NJU9 1138 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 FAM157AC9JC47 383 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 NPIPB4C9JG80 1138 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 PLPP3O14495 311 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 SYT7O43581 403 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 TSPAN2O60636 221 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 TSPAN15O95858 294 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 CTXN2P0C2S0 81 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 ZNF20P17024 532 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 FBLP22087 321 aaKnown RBP6.47□□□□□ -1.37
BEST3-212ENST00000553096 NME2P22392 152 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 OR3A2P47893 321 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 PPT1P50897 306 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 RAB5CP51148 216 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 CLDN6P56747 220 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 S100A10P60903 97 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 FABP9Q0Z7S8 132 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 IL15RAQ13261 267 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 RAB32Q13637 225 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 RBM39Q14498 530 aaKnown RBP6.47□□□□□ -1.37
BEST3-212ENST00000553096 ARL6IP1Q15041 203 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 C1orf140Q5VVS0 124 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 RPL7L1Q6DKI1 246 aaKnown RBP6.47□□□□□ -1.37
BEST3-212ENST00000553096 RTL6Q6ICC9 239 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 Q6ZRG5 221 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 ZNF101Q8IZC7 436 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 OR52N4Q8NGI2 321 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 RNF133Q8WVZ7 376 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 DNAJA3Q96EY1 480 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 MVB12AQ96EY5 273 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 FOXN4Q96NZ1 517 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 URM1Q9BTM9 101 aaKnown RBP6.47□□□□□ -1.37
BEST3-212ENST00000553096 WWTR1Q9GZV5 400 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 TMPRSS5Q9H3S3 457 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 PRDM13Q9H4Q3 707 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 PLEKHA2Q9HB19 425 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 SLC35D1Q9NTN3 355 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 C1orf123Q9NWV4 160 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 SRPK3Q9UPE1 567 aa6.47□□□□□ -1.37
BEST3-212ENST00000553096 ZFHX2Q9C0A1 2572 aaPredicted RBP6.47□□□□□ -1.37
BEST3-212ENST00000553096 IGHV3-20A0A0C4DH32 117 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 K7EPK0 472 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 ZNF354AO60765 605 aaPredicted RBP6.46□□□□□ -1.37
BEST3-212ENST00000553096 NPIPB7O75200 414 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 ADAP1O75689 374 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 NUDT14O95848 222 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 IFNA17P01571 189 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 SERPINA5P05154 406 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 HKR1P10072 659 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 RAB5AP20339 215 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 THBS4P35443 961 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 ZNF93P35789 620 aaPredicted RBP6.46□□□□□ -1.37
BEST3-212ENST00000553096 CAMLGP49069 296 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 NPY4RP50391 375 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 ZP4Q12836 540 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 GAGE1Q13065 139 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 EIF3IQ13347 325 aaKnown RBP6.46□□□□□ -1.37
BEST3-212ENST00000553096 SLC22A6Q4U2R8 563 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 ZNF468Q5VIY5 522 aaPredicted RBP6.46□□□□□ -1.37
BEST3-212ENST00000553096 ZNF529Q6P280 563 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 WDR74Q6RFH5 385 aaPredicted RBP6.46□□□□□ -1.37
BEST3-212ENST00000553096 C16orf47Q6ZP98 133 aaPredicted RBP6.46□□□□□ -1.37
BEST3-212ENST00000553096 TMPPEQ6ZT21 453 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 MARCH3Q86UD3 253 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 PLXDC1Q8IUK5 500 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 FAM71E2Q8N5Q1 922 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 PRSS33Q8NF86 280 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 OR9K2Q8NGE7 335 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 NUDT11Q96G61 164 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 AKR1E2Q96JD6 320 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 C14orf166Q9Y224 244 aaKnown RBP6.46□□□□□ -1.37
BEST3-212ENST00000553096 KIF26BQ2KJY2 2108 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 ALPK2Q86TB3 2170 aa6.46□□□□□ -1.37
BEST3-212ENST00000553096 BORCS7-ASMTA0A0B4J1R7 106 aa6.46□□□□□ -1.38
BEST3-212ENST00000553096 A0A1B0GX78 115 aa6.46□□□□□ -1.38
BEST3-212ENST00000553096 ALG1L2C9J202 215 aa6.46□□□□□ -1.38
BEST3-212ENST00000553096 NPIPA5E9PKD4 350 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms