RNA–Protein interactions for RNA: ENST00000552639.1

AC087897.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC087897.2, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087897.2-201ENST00000552639 MT-ND4P03905 459 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 C1GALT1C1LP0DN25 315 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 CXCR1P25024 350 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 LOXP28300 417 aaPredicted RBP3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 POLR2IP36954 125 aaKnown RBP3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 RANBP1P43487 201 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 TAS2R31P59538 309 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 VSNL1P62760 191 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 SIGLEC14Q08ET2 396 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 INCA1Q0VD86 236 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 PSG3Q16557 428 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 Q6ZSR6 202 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 BHLHA15Q7RTS1 189 aaPredicted RBP3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 SSX6Q7RTT6 188 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 WDR86Q86TI4 376 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 TMEM256Q8N2U0 113 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 OTUD6BQ8N6M0 293 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 OR4D6Q8NGJ1 314 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 OR2L8Q8NGY9 312 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 OR52P1PQ8NH57 321 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 SYNPRQ8TBG9 265 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 ENKURQ8TC29 256 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 DOK4Q8TEW6 326 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 ZBED3Q96IU2 234 aaPredicted RBP3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 ATP6V1G3Q96LB4 118 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 RBBP8Q99708 897 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 GGTLC1Q9BX51 225 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 ZNF442Q9H7R0 627 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 SLC38A10Q9HBR0 1119 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 AP3M1Q9Y2T2 418 aa3.14□□□□□ -1.91
AC087897.2-201ENST00000552639 A0A1W2PP64 1363 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 COL18A1P39060 1754 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 ARHGAP21Q5T5U3 1957 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 IGKV6D-21A0A0A0MT36 114 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 MGAT4DA6NG13 374 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 TVP23AA6NH52 213 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 BET1O15155 118 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 RBFOX2O43251 390 aaKnown RBP eCLIP3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 SC5DO75845 299 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 GATBO75879 557 aaKnown RBP3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 TRBV12-3P01733 135 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 CISD3P0C7P0 127 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 CD9P21926 228 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 KCNJ3P48549 501 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 ANGPT1Q15389 498 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 YIF1BQ5BJH7 314 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 FAM71E1Q6IPT2 247 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 GUSBP11Q6P575 273 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 FAHD1Q6P587 224 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 UBALD2Q8IYN6 164 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 LGI3Q8N145 548 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 GHSRQ92847 366 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 TMEM159Q96B96 161 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 SMARCD1Q96GM5 515 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 SNF8Q96H20 258 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 RNF157Q96PX1 679 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 TBL1YQ9BQ87 522 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 FRMD8P1Q9BZ68 369 aaPredicted RBP3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 COA1Q9GZY4 146 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 CHRNA10Q9GZZ6 450 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 GOLPH3Q9H4A6 298 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 EXOSC4Q9NPD3 245 aaKnown RBP3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 HEBP1Q9NRV9 189 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 SIGLEC7Q9Y286 467 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 ACOT9Q9Y305 439 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 NRAPQ86VF7 1730 aa3.13□□□□□ -1.91
AC087897.2-201ENST00000552639 RGPD3A6NKT7 1758 aaPredicted RBP3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 RGPD4Q7Z3J3 1758 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 IGHV7-4-1A0A0J9YVY3 117 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 FAM240AA0A1B0GVK7 77 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 A0A1W2PNU3 283 aaPredicted RBP3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 ERICH2A1L162 156 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 OR5H1A6NKK0 313 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 H0YJW9 148 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 POLR3GO15318 223 aaPredicted RBP3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 MAGEB4O15481 346 aaPredicted RBP3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 RRP8O43159 456 aaKnown RBP3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 SERPINB7O75635 380 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 LCN1P31025 176 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 CXCL12P48061 93 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 CD151P48509 253 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 PSMB2P49721 201 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 DYNC1I2Q13409 638 aaKnown RBP3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 MAD2L1BPQ15013 274 aaPredicted RBP3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 CDNFQ49AH0 187 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 C6orf99Q4VX62 202 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 HHATQ5VTY9 493 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 TMEM236Q5W0B7 351 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 APOBEC3HQ6NTF7 200 aaKnown RBP3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 Q6ZR03 302 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 ERO1BQ86YB8 467 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 CYB561A3Q8NBI2 242 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 OR9A2Q8NGT5 310 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 UBALD1Q8TB05 177 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 NT5CQ8TCD5 201 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 SFXN5Q8TD22 340 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 TMEM239Q8WW34 195 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 MRPL48Q96GC5 212 aaKnown RBP3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 KCNS1Q96KK3 526 aa3.12□□□□□ -1.91
AC087897.2-201ENST00000552639 OR4K3Q96R72 315 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms