RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CST4P01036 141 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 NGFP01138 241 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 S100A11P31949 105 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 APLNRP35414 380 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 FGL1Q08830 312 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 PRDX4Q13162 271 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 HLXQ14774 488 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 PIGYQ3MUY2 71 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 CALHM1Q8IU99 346 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 OR8H3Q8N146 312 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 NAXEQ8NCW5 288 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 TMEM230Q96A57 120 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 WBP1Q96G27 269 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 RTBDNQ9BSG5 229 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 PAPOLGQ9BWT3 736 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 FAM86C1Q9NVL1 165 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 UBQLN2Q9UHD9 624 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 ST3GAL6Q9Y274 331 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 MED12LQ86YW9 2145 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 TNRC6AQ8NDV7 1962 aaKnown RBP12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 TRAV17A0A0B4J275 112 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 OR5H14A6NHG9 310 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 DTYMKP23919 212 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 CLN3Q13286 438 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 NSUN5P2Q63ZY6 315 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 ZNF611Q8N823 705 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 OR10AD1Q8NGE0 317 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 NANOS1Q8WY41 292 aaKnown RBP12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 POM121Q96HA1 1249 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 CMSS1Q9BQ75 279 aaKnown RBP12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 SULT4A1Q9BR01 284 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 PDCD10Q9BUL8 212 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 OPA3Q9H6K4 179 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 GLRX2Q9NS18 164 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 CRIM1Q9NZV1 1036 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 CLCF1Q9UBD9 225 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 MAB21L2Q9Y586 359 aa12.08□□□□□ -0.48
RAB3IP-216ENST00000552199 DBX1A6NMT0 343 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 SFT2D2O95562 160 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 RPA2P15927 270 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 DEFB109BQ30KR1 87 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 CEACAM21Q3KPI0 293 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 SLC25A26Q70HW3 274 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 KCTD9Q7L273 389 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 Q8NFD4 153 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 SEC22AQ96IW7 307 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 FGF23Q9GZV9 251 aaPredicted RBP12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 ANXA10Q9UJ72 324 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 LINC00862A6NCI5 91 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 WNT5AP41221 380 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 RBM11P57052 281 aaKnown RBP12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 ARPC4P59998 168 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 SURF2Q15527 256 aaPredicted RBP12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 TMEM65Q6PI78 240 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 C3P1Q6ZMU1 363 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 MDP1Q86V88 176 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 ZDHHC23Q8IYP9 409 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 SAXO1Q8IYX7 474 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 HPSE2Q8WWQ2 592 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 ZNF75AQ96N20 296 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 ARL6Q9H0F7 186 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 COMMD9Q9P000 198 aa12.07□□□□□ -0.48
RAB3IP-216ENST00000552199 A0A0B4J2A0 478 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 ZNF891A8MT65 544 aaPredicted RBP12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 PDCD6O75340 191 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 WISP2O76076 250 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 FCGR3AP08637 254 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 SLC25A4P12235 298 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 CEACAM1P13688 526 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 PI3P19957 117 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 GLRA1P23415 457 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 NPBWR2P48146 333 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 BAMBIQ13145 260 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 BRICD5Q6PL45 260 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 ZNF546Q86UE3 836 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 DOCK7Q96N67 2140 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 MFFQ9GZY8 342 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 SHPKQ9UHJ6 478 aa12.06□□□□□ -0.48
RAB3IP-216ENST00000552199 RPS10-NUDT3A0A1W2PQS6 291 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 CD300LBA8K4G0 201 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM25EA8MYX2 175 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 AQP7O14520 342 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 CEACAM4O75871 244 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 PMELP40967 661 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 ECI1P42126 302 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 GPM6AP51674 278 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 SUPT4H1P63272 117 aaKnown RBP12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 CLLU1Q5K131 121 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 C11orf87Q6NUJ2 197 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 CLEC18BQ6UXF7 455 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 SLC30A7Q8NEW0 376 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 OR5A2Q8NGI9 324 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 TRIB1Q96RU8 372 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 IRF2BPLQ9H1B7 796 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 ZNF629Q9UEG4 869 aaPredicted RBP12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 ZNF732B4DXR9 585 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 RP2O75695 350 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 PGAM2P15259 253 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 FUT3P21217 361 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 OPRM1P35372 400 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms