RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 A0A0G2JRQ6 117 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 FAM159BA6NKW6 160 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 RFPL4AA6NLU0 287 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 C12orf77C9JDV5 145 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 RFPL4AL1F8VTS6 287 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 J3QT63 122 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 MT-CO2P00403 227 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 MOSP00540 346 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 RENP00797 406 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 SERPINA7P05543 415 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 C1GALT1C1LP0DN25 315 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 MYL9P24844 172 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 KIR2DS2P43631 304 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 OR3A4PP47883 348 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 REG1BP48304 166 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 KLK7P49862 253 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 HIST1H3AP68431 136 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 H3F3AP84243 136 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 PRDX1Q06830 199 aaKnown RBP4.97□□□□□ -1.61
VPS29-210ENST00000552130 RSU1Q15404 277 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 CLEC12AQ5QGZ9 265 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 LAMTOR1Q6IAA8 161 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 SMARCD3Q6STE5 483 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 HIST2H3AQ71DI3 136 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 GALNT10Q86SR1 603 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 C9orf40Q8IXQ3 194 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 TMEM86BQ8N661 226 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 PRSS3P2Q8NHM4 247 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 NEIL3Q8TAT5 605 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 SPPL2BQ8TCT7 592 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 CHCHD10Q8WYQ3 142 aaPredicted RBP4.97□□□□□ -1.61
VPS29-210ENST00000552130 MARC2Q969Z3 335 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 C18orf12Q96KH6 178 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 FAM19A4Q96LR4 140 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 RDH12Q96NR8 316 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 OLFM3Q96PB7 478 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 PFDN5Q99471 154 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 ARHGDIGQ99819 225 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 SLC25A39Q9BZJ4 359 aaPredicted RBP4.97□□□□□ -1.61
VPS29-210ENST00000552130 C20orf85Q9H1P6 137 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 MOB1AQ9H8S9 216 aa4.97□□□□□ -1.61
VPS29-210ENST00000552130 UTP11Q9Y3A2 253 aaKnown RBP4.97□□□□□ -1.61
VPS29-210ENST00000552130 ADAMTSL3P82987 1691 aa4.96□□□□□ -1.61
VPS29-210ENST00000552130 ERCC6Q03468 1493 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 TDRD15B5MCY1 1934 aaKnown RBP4.96□□□□□ -1.62
VPS29-210ENST00000552130 IGLV1-36A0A0B4J1U3 117 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 TRGV8A0A0C4DH27 118 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 IGHV3-38A0A0C4DH36 116 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 LINC00587B1AMM8 73 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 MANBAO00462 879 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 CRLF1O75462 422 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 ATG12O94817 140 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 IL3P08700 152 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 CT45A10P0DMU9 189 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 OR13C7P0DN81 318 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 IFI30P13284 250 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 DAOP14920 347 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 OMGP23515 440 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 PAX6P26367 422 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 RCVRNP35243 200 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 OR1E2P47887 323 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 RAB2AP61019 212 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 RAB5BP61020 215 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 CDK10Q15131 360 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 IRF4Q15306 451 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 CNPY1Q3B7I2 92 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 WDR38Q5JTN6 314 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 SPNS3Q6ZMD2 512 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 OAFQ86UD1 273 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 UBALD2Q8IYN6 164 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 C6orf223Q8N319 242 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 RAB42Q8N4Z0 105 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 OR4P4Q8NGL7 312 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 OR2A12Q8NGT7 310 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 OR13C6PQ8NH95 151 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 TAMM41Q96BW9 452 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 HIST1H4GQ99525 98 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 RIOK2Q9BVS4 552 aaKnown RBP4.96□□□□□ -1.62
VPS29-210ENST00000552130 MROQ9BYG7 248 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 TAS2R1Q9NYW7 299 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 THAP10Q9P2Z0 257 aaPredicted RBP4.96□□□□□ -1.62
VPS29-210ENST00000552130 OR12D3Q9UGF7 316 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 ANGPT4Q9Y264 503 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 DENND4AQ7Z401 1863 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 CCDC171Q6TFL3 1326 aa4.96□□□□□ -1.62
VPS29-210ENST00000552130 WDR7Q9Y4E6 1490 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 TRAV39A0A0B4J263 110 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 RBFOX3A6NFN3 312 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 OR4C46A6NHA9 309 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 K7EQG2 157 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 SLC17A2O00624 439 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 BET1O15155 118 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 RDH16O75452 317 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 REM1O75628 298 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 MMP7P09237 267 aaPredicted RBP4.95□□□□□ -1.62
VPS29-210ENST00000552130 OR10J4P0C629 311 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 OR5H8P0DN80 308 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 ESDP10768 282 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 PSMB1P20618 241 aaKnown RBP4.95□□□□□ -1.62
VPS29-210ENST00000552130 CXCR1P25024 350 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms