RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 EMC8O43402 210 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 GALR3O60755 368 aaPredicted RBP2.9□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF254O75437 659 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 HSBP1O75506 76 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 CLPXO76031 633 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 AQP8O94778 261 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 LYPD3O95274 346 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 STAMBPO95630 424 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 ACTL6AO96019 429 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 IFNA16P05015 189 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 OR8U8P0C7N1 319 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 UBCP0CG48 685 aaKnown RBP2.9□□□□□ -1.95
LIMA1-208ENST00000551691 SLC35E2P0CK97 266 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 UCHL3P15374 230 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 FASP25445 335 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 PSMD4P55036 377 aaKnown RBP2.9□□□□□ -1.95
LIMA1-208ENST00000551691 CLDN18P56856 261 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 SELENOTP62341 195 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 PPIDQ08752 370 aaKnown RBP2.9□□□□□ -1.95
LIMA1-208ENST00000551691 ECH1Q13011 328 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 MAB21L1Q13394 359 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 ARFRP1Q13795 201 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 TAF1AQ15573 450 aaPredicted RBP2.9□□□□□ -1.95
LIMA1-208ENST00000551691 OLFML2AQ68BL7 652 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 SASS6Q6UVJ0 657 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 DGAT2L6Q6ZPD8 337 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 ACOT7LQ6ZUV0 252 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 SPERTQ8NA61 448 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 PROKR2Q8NFJ6 384 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 OR5M1Q8NGP8 315 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 OR8K3Q8NH51 312 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 FNDC9Q8TBE3 224 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 MITD1Q8WV92 249 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 SKA2Q8WVK7 121 aaPredicted RBP2.9□□□□□ -1.95
LIMA1-208ENST00000551691 RAD51AP1Q96B01 352 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 POM121L2Q96KW2 1035 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 PGLYRP4Q96LB8 373 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 RILPQ96NA2 401 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 OR8B4Q96RC9 309 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 TBX15Q96SF7 602 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 HBEGFQ99075 208 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 SORT1Q99523 831 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 KCTD14Q9BQ13 255 aaPredicted RBP2.9□□□□□ -1.95
LIMA1-208ENST00000551691 C1QTNF6Q9BXI9 259 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 TMEM59Q9BXS4 323 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 AICDAQ9GZX7 198 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 EHD1Q9H4M9 534 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 TNFRSF19Q9NS68 423 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 GIN1Q9NXP7 522 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 C15orf41Q9Y2V0 281 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 SAR1BQ9Y6B6 198 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 V9GY05 133 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 ARFGEF3Q5TH69 2177 aa2.9□□□□□ -1.95
LIMA1-208ENST00000551691 KCNE1BA0A087WTH5 132 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 KBTBD11-OT1A0A1B0GTJ5 212 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 LINC00854A0A1B0GVQ3 168 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 WI2-2373I1.2A0A1W2PRP0 233 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 C3orf84H3BNL1 204 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 H7C417 338 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 H7C423 109 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 M0QX08 132 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 POLR3GO15318 223 aaPredicted RBP2.89□□□□□ -1.95
LIMA1-208ENST00000551691 MGRN1O60291 552 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 EEDO75530 441 aaKnown RBP2.89□□□□□ -1.95
LIMA1-208ENST00000551691 CCNB2O95067 398 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 FGGP02679 453 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 ALDOBP05062 364 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 CRHP06850 196 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 MELTFP08582 738 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 TACSTD2P09758 323 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 TCN1P20061 433 aaPredicted RBP2.89□□□□□ -1.95
LIMA1-208ENST00000551691 DCKP27707 260 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 SLC1A2P43004 574 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF140P52738 457 aaPredicted RBP2.89□□□□□ -1.95
LIMA1-208ENST00000551691 SLC25A1P53007 311 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 SLC25A11Q02978 314 aaKnown RBP2.89□□□□□ -1.95
LIMA1-208ENST00000551691 PAX8Q06710 450 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 BAMBIQ13145 260 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 ASAH1Q13510 395 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 GUSBP1Q15486 140 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 SLC9A3R2Q15599 337 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 ZNHIT3Q15649 155 aaPredicted RBP2.89□□□□□ -1.95
LIMA1-208ENST00000551691 TAF9Q16594 264 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 DGUOKQ16854 277 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 NSUN5P1Q3KNT7 163 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 UFSP1Q6NVU6 142 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 FAAP20Q6NZ36 180 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF836Q6ZNA1 936 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF600Q6ZNG1 722 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 FRA10AC1Q70Z53 315 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF329Q86UD4 541 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF677Q86XU0 584 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 PRR22Q8IZ63 422 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 CA13Q8N1Q1 262 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 OR5B3Q8NH48 314 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF721Q8TF20 911 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 PPWD1Q96BP3 646 aaKnown RBP2.89□□□□□ -1.95
LIMA1-208ENST00000551691 CMTM7Q96FZ5 175 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 NOL4LQ96MY1 436 aaPredicted RBP2.89□□□□□ -1.95
LIMA1-208ENST00000551691 HIST1H4GQ99525 98 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms